NONHSAT122833
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122833 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
906 nt |
Genomic location |
chr7+:114066568..114282601 |
Exon number |
6 |
Exons |
114066568..114066734,114174673..114174761,114268596..114268732,114269861..114270060,114271584..114271760,114282466..114282601 |
Genome context |
|
Sequence |
000001 TGATGCAGGA ATCTGCGACA GAGACAATAA GCAACAGTTC AATGAATCAA AATGGAATGA GCACTCTAAG CAGCCAATTA 000080
000081 GATGCTGGCA GCAGAGATGG AAGATCAAGT GGTGACACCA GCTCTGAAGT AAGCACAGTA GAACTGCTGC ATCTGCAACA 000160 000161 ACAGCAGCTC TCCAGGCAGC AAGACAACTT CTTTTACAGC AGCAAACAAG TGGATTGAAA TCTCCTAAGA GCAGTGATAA 000240 000241 ACAGAGACCA CTGCAGTGCC TGTGTCAGTG GCCATGATGA CTCCCCAGGT GATCACCCCT CAGCAAATGC AGCAGATCCT 000320 000321 TCAGCAACAA GTCCTGTCTC CTCAGCAGCT ACAAGCCCTT CTCCAACAAC AGCAGGCTGT CATGCTGCAG CAGAACAACT 000400 000401 ACAAGAGTTT TACAAGAAAC AGCAAGAGCA GTTACATCTT CAGCTTTTGC AGCAGCAGCA GCAACAGCAG CAGCAGCAAC 000480 000481 AACAGCAGCA ACAACAGCAG CAGCAACAAC AACAACAACA GCAGCAACAA CAGCAGCAGC AGCAGCAACA GCAGCAGCAG 000560 000561 CAGCAACAGC ATCCTGGAAA GCAAGCGAAA GAGAGCAGCA GCAGCAGCAG CAGCAACAGC AATTGGCAGC CCAGCAGCTT 000640 000641 GTCTTCCAGC AGCAGCTTCT CCAGATGCAA CAACTCCAGC AGCAGCAGCA TCTGCTCAGC CTTCAGCGTC AGGGACTCAT 000720 000721 CTCCATTCCA CCTGGCCAGG CAGCACTTCC TGTCCAATCG CTGCCTCAAG TGGCTTAAGT CCTGCTGAGA TTCAGCAGTT 000800 000801 ATGGAAAGAA GTGACTGGAG TTCACAGTAT GGAAGACAAT GGCATTAAAC ATGGAGGGCT AGACCTCACT ACTAACAATT 000880 000881 CCTCCTCGAC TACCTCCTCC AACACT |
Predicted Small Protein
Name | NONHSAT122833_smProtein_2:217 |
Length | 72 |
Molecular weight | 7791.2017 |
Aromaticity | 0.0422535211268 |
Instability index | 71.924084507 |
Isoelectric point | 4.44049072266 |
Runs | 11 |
Runs residual | 0.00637509266123 |
Runs probability | 0.046297634533 |
Amino acid sequence | MQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSGDTSSEVSTVELLHLQQQQLSRQQ DNFFYSSKQVD |
Secondary structure | LLLLLEEEEELLLLLLLLLEEHHHHLLLLLLLLLLLLLLLLEEEHHHHHHHHHHHHHHHH LLEEEEEEEEL |
PRMN | - |
PiMo | - |