NONHSAT122837

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT122837

Source

NONCODE4.0

Same with

,

Classification

overlapping(AS),antisense

Length

565 nt

Genomic location

chr7-:114488827..114658645

Exon number

6

Exons

114488827..114488847,114550893..114550970,114553761..114553838,114556761..114556834,114582356..114582496,114658473..114658645

Genome context

Sequence
000001 ATTAAGAAAT CATAAGATAT ATTGAAACTA TTTTCACATT TGCCTACTTT TCCTTTTTCT GTTTTCCTTT TAATTATACA 000080
000081 AATGCTTTAT GGAATAACTG TCTGGAGTAG ACAAGAGGAA AAGTACTATG AACATAAATA CAAAAATAAA ATTCTGGTAT 000160
000161 CCATTAACAT TCTGTCATAT CCCAAAATCA CTCAAAGTTT TTTCTAAAAA TACTTACTTC TAATGAGTTC ACCATCCGAA 000240
000241 GGATTTCCCC AAATGGACTG GTCTTGCATC TCTCCATGTG TGAAGTGGCT ATTGGTAGCT TGAGTTATAT CTTTTAGTCT 000320
000321 TCTGGGAGTT CATAGTCTAT AAGGCCAGAG GCAGAAGAAG GCAGCAATGT AGCAGCAGAA CAGTCACACC AAAGAACCGA 000400
000401 CATGACACCA CAGTGGAAAA TTTCACACCT GAGCTCATGT GACAGGTCAC ATATATTATT AAAATTGCTT CTTACGGCCA 000480
000481 CCCAGATTTT TTCCTTCTGA TAAATTAGTC CTTGAAGAGG GTCTGAAATT TTCTTAGTAT CACTGTGCAT GTCTTCTATG 000560
000561 ACTGA
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Predicted Small Protein

Name NONHSAT122837_smProtein_401:499
Length 33
Molecular weight 3716.3761
Aromaticity 0.09375
Instability index 57.840625
Isoelectric point 9.30438232422
Runs 6
Runs residual 0.00414540816327
Runs probability 0.0113937466879
Amino acid sequence MTPQWKISHLSSCDRSHILLKLLLTATQIFSF
Secondary structure LLLHHHEELLLLLLHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -