NONHSAT122837
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122837 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS),antisense |
Length |
565 nt |
Genomic location |
chr7-:114488827..114658645 |
Exon number |
6 |
Exons |
114488827..114488847,114550893..114550970,114553761..114553838,114556761..114556834,114582356..114582496,114658473..114658645 |
Genome context |
|
Sequence |
000001 ATTAAGAAAT CATAAGATAT ATTGAAACTA TTTTCACATT TGCCTACTTT TCCTTTTTCT GTTTTCCTTT TAATTATACA 000080
000081 AATGCTTTAT GGAATAACTG TCTGGAGTAG ACAAGAGGAA AAGTACTATG AACATAAATA CAAAAATAAA ATTCTGGTAT 000160 000161 CCATTAACAT TCTGTCATAT CCCAAAATCA CTCAAAGTTT TTTCTAAAAA TACTTACTTC TAATGAGTTC ACCATCCGAA 000240 000241 GGATTTCCCC AAATGGACTG GTCTTGCATC TCTCCATGTG TGAAGTGGCT ATTGGTAGCT TGAGTTATAT CTTTTAGTCT 000320 000321 TCTGGGAGTT CATAGTCTAT AAGGCCAGAG GCAGAAGAAG GCAGCAATGT AGCAGCAGAA CAGTCACACC AAAGAACCGA 000400 000401 CATGACACCA CAGTGGAAAA TTTCACACCT GAGCTCATGT GACAGGTCAC ATATATTATT AAAATTGCTT CTTACGGCCA 000480 000481 CCCAGATTTT TTCCTTCTGA TAAATTAGTC CTTGAAGAGG GTCTGAAATT TTCTTAGTAT CACTGTGCAT GTCTTCTATG 000560 000561 ACTGA |
Predicted Small Protein
Name | NONHSAT122837_smProtein_401:499 |
Length | 33 |
Molecular weight | 3716.3761 |
Aromaticity | 0.09375 |
Instability index | 57.840625 |
Isoelectric point | 9.30438232422 |
Runs | 6 |
Runs residual | 0.00414540816327 |
Runs probability | 0.0113937466879 |
Amino acid sequence | MTPQWKISHLSSCDRSHILLKLLLTATQIFSF |
Secondary structure | LLLHHHEELLLLLLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |