NONHSAT122935

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT122935

Source

NONCODE4.0

Same with

,

Classification

sense

Length

565 nt

Genomic location

chr7+:116859079..116863187

Exon number

3

Exons

116859079..116859230,116861977..116862116,116862915..116863187

Genome context

Sequence
000001 AGTTGGGAAG TTATGACACA AACATTGGAC ATCTCTGACA TATTTTTTCT CGTTTTCAGC TTTTCGGATG ATCCCTTATC 000080
000081 CCTTGGAAAA GGGGCACCTA TTTTATCCTT ACCCAATCTG TACAGAAACA GCAGACCGAG AGCTGCTTCC ATCTTTCCAT 000160
000161 GAAGTCTCAG TTTACCCAAA GAAGGAGCTT CCCTTCTTTA TTCTCTTTAC TGCTGGATTA TGTTCCTTCA CAGCCATGCT 000240
000241 GGCCCTCCTG ACACATCAGT TCCCGGAACT TATGGGGGTC TTCGCAAAAG CTATGATTGA CATTTTCTGC TCGGCAGAGT 000320
000321 TCAGGGACTG GAATTGCAAG AGTATTTTCA TGCGTGTTGA AGATGAACTG GAAATCCCTC Cggcacctca atctcaacat 000400
000401 ttccaaaact gaactcatca cccctcttcc cccaccacca aaactgctcc tcctcctgta ttcctgacct ccgccatcca 000480
000481 ccccgttgct caagccggaa actcggcagc ccttccaaac tcttccctct ctcactcccc acatcccatc gtctcggcct 000560
000561 tcaca
[back to top]

Predicted Small Protein

Name NONHSAT122935_smProtein_362:466
Length 35
Molecular weight 3954.765
Aromaticity 0.0588235294118
Instability index 56.7352941176
Isoelectric point 9.99627685547
Runs 6
Runs residual 0.00967982129561
Runs probability 0.0340929164458
Amino acid sequence MNWKSLRHLNLNISKTELITPLPPPPKLLLLLYS
Secondary structure LLHHHHHHHLLLLLLLLLLLLLLLLHHHHEEELL
PRMN -
PiMo -