NONHSAT122983
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT122983 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1279 nt |
Genomic location |
chr7+:119259423..119264891 |
Exon number |
2 |
Exons |
119259423..119260624,119264815..119264891 |
Genome context |
|
Sequence |
000001 ACTACTTAGA ATGCTTTCAT ACACCTAAAT GTGAAAAAAA ATAGAAAAAG TTTAGAGATA ATTATCAACC TATTTTTTAT 000080
000081 TTCTGCAGCC CACAAGACAA ATGTGACACC AAAATTTCAT AACTTAAAAA GCACATTAGA CCTTTCCTGA CAATATGATG 000160 000161 CACCTCCAAA ATCATAGGCA GCAATACTTT CAAAAATCAG CTCCACAGCT ACCTCACAAA GACTTACCTC ATTTTGATGA 000240 000241 TTTCTTACAG TTCTAAACAC TGTCATTGTA AGACTGTTCT GTACACAACC TTAAGTTCCA AAATGAGGAA GGACATTTTC 000320 000321 TAGGCTTCAT ACTGTGTTTG GAGAGAATGA GGTTAATATT TTCCCTCAGC AGTGAGGATC TGCAGTCCAG CATCTTTAAT 000400 000401 ATAGAGACTG CCAGGGGAAC AGGAAGCAAT GATGGGAATT ACTTTTTCCC TTTTCCCTCT GTGAAAACTA TGAGGAATAT 000480 000481 GTCTAAAAGG GTAAAATGAT TTAACTTAGA GATTGGGTAG AAGATTACAT TTCTTACTCT TTTTCTTCTC ATTGCTGATT 000560 000561 AAAACCCTCT TCTACCTCCA AAGCAACAAC TTGTCTTTGA GATTCAATTC TCTATTTTCT CTGGGGAAAT ACAAACACTA 000640 000641 ACTTGATCTT TATTTAGCAG TAATCTCCAA AGTGTAGCAC GTGTATACAA TTACAATGAC TTTGTAGCAG TTCTCTAAGT 000720 000721 TCCTTCACTT AGAGAACAAC CTAAGTGCTG ATATTAGACT ACTTAGGTTA TCATCCTATC CATTTATTTG TTCATTCAGG 000800 000801 AGTTCAGTCA GGCTTTAGAG CTTTCACCCG GCAACGGTCA ACTACCAACT AGACATATAG GTTTCTGGGA GACAAAACGT 000880 000881 AGATAACATG TGATTCACAT CTTCCAAAAG TTTAGTTTCA GGAGAAGGCA AATATGTGAA CAAATAATCA TGATATAACT 000960 000961 CATAGTGGGA TATTTGAAGT GTGAAAAAAT AGATCCTAGA ATACAGATTT CTAAATCTAT GAATTCTATG CTTCATAGCA 001040 001041 CACGCGTGTG CACGTGcaca cacacacaca cacacacaGG ACAAGATCAA GAAAACAAAT AGTTggccag gcatggtggc 001120 001121 tcacgcctgt aatcccagaa ctttgggagg cctatacagg tggattagct gaggtcagga gtttgagacc agcctggcca 001200 001201 acCTTGTCCA TCAGAACATA TTTATTAGCA ATGAAGAACA TACCCAAATA CCAATTCCTA GCTATTTATA GTATGAAAG |
Predicted Small Protein
Name | NONHSAT122983_smProtein_236:322 |
Length | 29 |
Molecular weight | 3308.9138 |
Aromaticity | 0.107142857143 |
Instability index | 40.9607142857 |
Isoelectric point | 9.51165771484 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0336639160169 |
Amino acid sequence | MISYSSKHCHCKTVLYTTLSSKMRKDIF |
Secondary structure | LEEELLLLLLLLEEEEEELLHHHHHLLL |
PRMN | - |
PiMo | - |