NONHSAT123102
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1556 nt |
Genomic location |
chr7+:124824624..125019375 |
Exon number |
9 |
Exons |
124824624..124824667,124826098..124826546,124835002..124835138,124969736..124969801,124970311..124970457,124975307..124975469,124987179..124987261,125003489..125003570,125019112..125019375 |
Genome context |
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Sequence |
000001 GTTATACTGG AGGACTTTCT CTTTGGAATT GCTGTGCAAA TAAGGTCACT GGGTAATAGG ATGTAAAGAG GAGTTCTCAA 000080
000081 AACAACCTCA CAGACCCAGA ATAATCAAAA CAATTGAAGA CTTAACTTCA ATTTCAAAAC TTACCACAGA GCAAGAGTAA 000160 000161 TCAAGACAGT ATGGTACTTC CCTAAGGACA AACATATATG AATGAAAGAG AAACCAGATT TTGGAAATTT TAAAGAGTGT 000240 000241 CAAGACCATT CAGCAAGGAA TGAATAGTCT TTTCAACAAA TTGTGAGACA ATAGATATTC ACATGCAAAA AATGTACCTG 000320 000321 GACTCCTACC TCACGCCATA TAAAAATATT AACTCAAAAT GGATTATAGG GAGGAAGTGG AGGAAGATGA CCAGAAAAAA 000400 000401 CCTTCCAGTG ATTATCCCTA ACTTGCCCTG CAGGAAGACC AAATTGAACA ACTATCCACA AAGGAAAGCA CCATCATATG 000480 000481 AGGCAAAAAT CAGATATGTC CTGAGAGTTT CTGAAGTTAT TTAACTGGTT CAATGAGAAT TTAATCAAGG TCTGCTTTAT 000560 000561 ATCAAAATTT ATGATTTTTA TTCAATGCCA TACATAGAAT TTGTTCACAG TTATCATCAA ACACACTCAT GAAACTAACA 000640 000641 CAGACATCAT GTAGATCATG GATGTAAGGC TTTGAAACTT GAGGCAGAAA AAACAGGCTA AGGATGTGTG GTTCCATACT 000720 000721 CTCTTGCAAT GCCGGGGGGC AGCAACTGAA GCTACCAGTC AGGCCACAAG ATTATGAGGG TAAACAACTG ATATTCTGCA 000800 000801 GTGCACTGTA TTGCCAGAAG ATTTTGCCCA AATGTAGGCT AATCGATGTA AAGAGCAAAT TCTGAGTATA AACTTCTTTG 000880 000881 TAAGTGCTTA CTTGTTCTTT TGCAAAGTCC AAAATAATCA TCGGGAGAAG AATGGCCTCT TCTTCAACAA AAACACCACA 000960 000961 AAACAGTTGG TACCATTAAA CACAGTTCCT CCATCTAGAA AACAAGGACC CCAGTTATTC CAGCTGTTAA ATGGAGTGGA 001040 001041 TCAAAAGGCT GATTAAATGT AACGGATTCC AAAGAATGGC TGGCACATAG TTCAGGGTAT GTGTGGAGGT TTGTTACATA 001120 001121 GGTAAATGGC ATGACACGAA GGTTTGATGT AAAGACTATT TCATCCCCTA GATCCAGTGA TTAATCAATA TGTCTATGAG 001200 001201 TGGCTAAATT TTATTGCACC ATTCTGAAGA ATACAAAATT TGTCACTCCT CCGAGAGACA CTTAATATTT GACCTGGTTC 001280 001281 ACATGAGAGA ATTCTAAATG GATAAAGAAA TCCCTGAGGA AGGCTGCAGA AGGCTGTGGA TGTCTTCTCT GGAACATGTA 001360 001361 GTTTTATGTA ACAACATACC ACAGTAATGG ACCTTCTTCT ATAATTCATA GAAAGCCATT AAATGATTTA ATATCAAAAA 001440 001441 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001520 001521 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT123102_smProtein_302:523 |
Length | 74 |
Molecular weight | 8856.5095 |
Aromaticity | 0.109589041096 |
Instability index | 46.2465753425 |
Isoelectric point | 10.454284668 |
Runs | 11 |
Runs residual | 0.00653999116217 |
Runs probability | 0.0298614122143 |
Amino acid sequence | MQKMYLDSYLTPYKNINSKWIIGRKWRKMTRKNLPVIIPNLPCRKTKLNNYPQRKAPSYE AKIRYVLRVSEVI |
Secondary structure | LLEEEELLLLLLLLLLLLHHHHHHHHHHHHHLLLLEEELLLLLLLLLLLLLLLLLLLLLL EEEEEEEEELEEL |
PRMN | - |
PiMo | - |