NONHSAT123104
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123104 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
968 nt |
Genomic location |
chr7-:124870580..124904328 |
Exon number |
6 |
Exons |
124870580..124870614,124870622..124870895,124888355..124888495,124890034..124890111,124899849..124900056,124904097..124904328 |
Genome context |
|
Sequence |
000001 AGCCGGCCTG CACCCAGGTG AAATAAACAG CCATGTTGCT CACACAAAGC CTGTTTGGTG GTCTCTTCAC ATGGACGCGC 000080
000081 ATGAAATTTG GTGCCGTGAC TTGGATAGGG GGACCTCCCT TGGGAGATCA ATCCCCCGTC CTCCTGCTCT TTGCTCCATA 000160 000161 AGAAAGATCC ACCTACGACC TCACGTCCTC AGACCGACCA GCCCAAGAAA CATCTCAGCA ATTTCAAATC CGTTTAAGCT 000240 000241 CCTGTAAAGA CGCTCCTTTT TATTAGGCCC CAGTCTCATT CCAGACACCA GACCAACTTA GACTGTGCCC CAAAAAACTT 000320 000321 GTCATCCCTA CTATCTTCTG TCTAGTGATA CTCCTATTCA CCGTTCTCAA CTACTCATAC ATGCCCTATT CTTGTTTACA 000400 000401 CTGCCGGTTT ACACTGTTTC TCCATGCCAT CACAGCTGAT GTTCCAAACC TTATGAATCT ACTGTAGCTG ATCTAGATAC 000480 000481 ACTTCAGGTC TCAGCTGAGA ACTCACATCC TTCTGAAGCT TATAAGACTT GGGCAAAATC CAACTTGAAT CAATTAGTGA 000560 000561 AACAGAATGA ATCCACCTTT TCACCACTTC AATCAAATGC CAGTTAGTAG CAATTAGTAC TCACTGAAGA TGATATACGA 000640 000641 TCCTGAAAAT TCTAATCAGG GAAAAAAAAT CCTGGGGAGA AATTCAAGCT AGCTGAAGAA ATTTGCATAA GTAATGGGGA 000720 000721 ACCAAATGTT AATCACCAAG ACAATGGGGA AAATGTCTCC AGGGCATTTC AGAGATCCTA GAGGCAGCTT TTCCCATCAC 000800 000801 AGGCCTGGAG GCCTAAGAGG GAAAAAGTGG TTTCTTGGGT TAACCTTGGG ATGTGGCATC CTGCATCCCA GTCACTCCAG 000880 000881 CTCCAGCCAC GGATACAAGG GCCAAGGTAC AGCTCAGCCC ATTGCTTCAA AGGCCCTAAA CGTTGACAGC TTCCATGTGG 000960 000961 TGTTGAGC |
Predicted Small Protein
Name | NONHSAT123104_smProtein_32:160 |
Length | 43 |
Molecular weight | 4565.4011 |
Aromaticity | 0.142857142857 |
Instability index | 44.2071428571 |
Isoelectric point | 8.49798583984 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.0425621700132 |
Amino acid sequence | MLLTQSLFGGLFTWTRMKFGAVTWIGGPPLGDQSPVLLLFAP |
Secondary structure | LLHHHHHHLLHHHHHHLLLLEEEELLLLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |