NONHSAT123133
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123133 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
957 nt |
Genomic location |
chr7+:126904173..126913094 |
Exon number |
4 |
Exons |
126904173..126904259,126904887..126904958,126906423..126906527,126912402..126913094 |
Genome context |
|
Sequence |
000001 AAATATATAT ATATATATGT ATATAATGCA AATTTTAACT ATAGTTAAGC ATGTATACAT AATATATATG TTTACAGTAT 000080
000081 TACACATTTG AATTCAACTA GGGTTAAGCT ACTTGGCTTC TCAAGAATGG CTTCTAAGTG TCTTACCGTG CAACCCTGGA 000160 000161 CTCAAAATGC TCTTGGAACC ATTTTTAAAT GTCTTTCAAG TTTCCTCATT AATTAGTGAG TTGAATAAAA TCTTTGACAA 000240 000241 TTGCTCATTC TATATTTGCA TGAGCTAACA TGGCAATATA TAAGGCTAAA CCAAATATTA TTTTAGCAAC ACTGTATTTC 000320 000321 CTCACTCTTA CTCGGTGGTC CCCAGGCAGC ATTCTCAGCA ACAGCTGCCA AACCATCCAA GAATGGACTG CTTATTCAAC 000400 000401 CAGCTGGGGG AGGTGGTCTT TCCATTGCAA TTGGGTACAC TGGGATTCCT GTTTAAGAAA GCATTCTATG AATGAGTGTT 000480 000481 GATTTAATTA ACCCTAAGAA AAGTTAAGCT TCACGAAGTG ACAAATTTAA TTTCATGACT TTAAAAAATG AAGCTCTAAC 000560 000561 CTTGAGATAG ATATCTTTCC AAAACTGTAA CCACTAAGGT TCTACTTGAA ACAAGCAGCC AGCTATACCC TTACCTCCAA 000640 000641 TGAGAGTACA TGTGTAGGGC TTTAATCAGA AGTTAGTTGT AAACAGGGAA AATGCTATTA GCAAACTCAT TGTGTAGGCT 000720 000721 TCCCTTTAAA CATGTCTTTG TGGAGGCACT TCTCCCAACT ACATGGTGAC AACAAAGAGA TGTCAAGAAA AAGGAAGAAT 000800 000801 TTTCTATACC ACGAAAGGCA TTGATTCAAT ACTTCCACTT CTCCAGCTAC CTCATAAATT GTGGAACTTG GGAGAGCAGC 000880 000881 TTAGGGACAT AAGTACTTAG GATGTTAACA ACTAAACTTA ACTATAGTCA TGAGAATAAT TGCTGTATTC CATTTAT |
Predicted Small Protein
Name | NONHSAT123133_smProtein_269:481 |
Length | 71 |
Molecular weight | 8271.4099 |
Aromaticity | 0.157142857143 |
Instability index | 61.6042857143 |
Isoelectric point | 8.83758544922 |
Runs | 13 |
Runs residual | 0.0408769448373 |
Runs probability | 0.0429728370905 |
Amino acid sequence | MAIYKAKPNIILATLYFLTLTRWSPGSILSNSCQTIQEWTAYSTSWGRWSFHCNWVHWDS CLRKHSMNEC |
Secondary structure | LLEEELLLLEEHHHHHHHHHHLLLLLLLLLLLHHHHHHHHHHLLLLLEEEEEELEEEEHH HHHHLLLLLL |
PRMN | - |
PiMo | - |