NONHSAT123138

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT123138

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5155 nt

Genomic location

chr7-:126999844..127004813

Exon number

1

Exons

126999844..127004813

Genome context

Sequence
000001 GAGGAAGAGC TGTTTTTCTG TTCCAAGTCC AGCACTTCCA CCCTTGCCTG TCTACTTCAC TGGACTTTCT TCCAACAACT 000080
000081 CCTCCTCTTT ACCCCTCCCC AGCTTCTGTC TCCCTGTCCA CTAGCTCCTC TTCCTCAACC TACAAACATG CTCAAATTCC 000160
000161 TTTCAGTCAA AAAATAAACT TCTCTTCTAT ACTACCTTGA ACCTAGTTAC TGCCATCTAG TCTGTCAAAC TTCCATGTGC 000240
000241 TCTCATACTA CCCTGTTTTA GTACTGATTC TGTCACATTG TAATTGTTTA TTTCCTTGTT TTCCTTCTAT ATCAGACTGT 000320
000321 AAGCTTCTGA GAAATCTGTC TCTTGATCCT GGTTGATTCA CCGAAGCCCA AGCTAGTTCC TAGTGCATCG TACGCATTCA 000400
000401 GTAAATATTT TTTGAATGAA TGAACAATGT TAGAGCCATG CCTCTGCCAT TCACTTTGTG AACTACCTGT AATTTTTTTC 000480
000481 TACCCCTACA TTTCGGTTGA AAGTTCACTT GAAGGTCACC ACATAAATGT GAAATCTAGT GGCTTCTCTC TTTACATCAT 000560
000561 GCTTGACCTC TGCAACCATT AGTGCTTACA AATTTACCTT TTCCACACAT TCATGGTCAC GTATACCTGG GTCATTTTGG 000640
000641 GCCAGTCTCA GTATTGCATT CAAAAGAAGC AGACAAGCCC CGAACCTTTG GAAAGTAATG AACTTCTGTA ATATATTAGT 000720
000721 GAAATCTTCT AATGAGATAG AAATATACAA TTACATAAAG CTCAGCAAAC TTCAAATAAG TTCTTTTTAC CCACCTTCCC 000800
000801 ATATCCTTAC ACAGCTTGGC ACCTTCAATC TCTCTTTTGT AACAGTTCAC CCAAAACTTG TACACTTTTG GCCAAAAACC 000880
000881 CCTTGTCCTT TGTCCCCTTT TTTCATCTTC TATGTTTATT TTCTTCCAAG AATAGATTAT TCTTTCCAGT TTAAATCACT 000960
000961 TTAGCCTCTT TTGGCTCCTT CCAACCAAGT TCTTTCCTAA ACCAGTTATC TTACTCAGTA TTTTAGAAGT CCAGGAGCAT 001040
001041 TGTCTTGATT TCATTTGGTT TGCCCTTACC AACTTTCTTT GCATCATTTT ATTTAATCTT AATGCCTCAC ATCAGTGAGT 001120
001121 ATTCCCTGAC CTCCTGGGTG TCTCCCTTCT GTGTCTCTGT GGTGCCCCGT TTATAACTCT CTGGAAATAA TCTATTTCTA 001200
001201 TCTCTTCTCT AGGCTATACA TTTCTTAAGG GTAGGAGTCC TGTCTTTTTT TTGTACCCCC ATATCTAGCA TAGTACCTGG 001280
001281 AACATGGTGG GTGTTGATAA ATGTTTATTG GACTGATGCT TCTGTGAAAT TTAATACTTT CTCTTTTGCC ACTGGCTTTT 001360
001361 GTTTTGTTAC TAGGTCTTCA AATATGGATT AAGGTTTCCT TAATGTCTTT TTTTCTTTTT ATATACTCTT AGTGATTCCT 001440
001441 CTATTCCCGA GGTATCACTT ATCACTTCCA TAAAGATGAC TCCAGGTCCG TTTTCTAGTC TGGCTGTTCT CCTTATTATA 001520
001521 AGACCATTTG TTTCCAAAGT TGAATGTCAG ACATCTCCAC ATGAATGTGT CACCAGTATC TTAAATGCAA CAAAAAACTC 001600
001601 AGTAATCCAA ACTTATCTTC CTTTTAAAAT TTCTTCCTAT GTGCTCCATG TCTCAGTTGT TCTAACCCCT ACCCTTCCGG 001680
001681 TTACCTATGC TAGTTGGAAT CCTGGCAAAT GCCCTAACTT CTTTCTTTTA TACTCTCCCT AATCTGTGAT CAATGCCTAT 001760
001761 CCATCCTGCC TCTGAATGTT TTTCACGTTT GCTTCCCCTT CCCATCTCCA CTTTTAGTAG TTTTGTTATC ACTTACCTTC 001840
001841 ACTATTGCAG TAGTCTCTTA ACTGACCTCT TTTCTAATCT GTCTTCCGTG CTGTTGTTAG AAATATCTTC CTAAAACACA 001920
001921 GATCTGTTGT TACTGTATGT TCATCGCTTG ACTAATTTAC TTATCTTTCA GGTCTCTGCC AAATGTCACT TCTAAATAAA 002000
002001 GTATGTCTGT CTTCTTTGTT GTTTGTTTCA TGTTCCTTTC CTACTGTCAT CTAATACTGT TTGTAATTGT GTTTATATTT 002080
002081 GTGCATTGAT TTGTTTAATG TCTTTCTTCC CACTGGAGAG ATTTATGTAA GGGACTGGGG AGAGTTATGT AGACCCTGGG 002160
002161 CCTAGCACAA TGCTCGGGAC ATAGTAACAC TTAAAACATA TCTGTTGAAT GAGTGGATGG ATAATAGCAA AGTACAGGCA 002240
002241 GTGCAGGCAA ACAGATGCCA AGTAGCAAAG GCAGGGAAAT TACAGGGTCC TAGACTCTTA GTACATTCTC ACAGACCTTA 002320
002321 ATCTGTAGTT TAAAATAGTA ATGGGCTTCT CTCTTTTGCT TTTTGCATTT ATTTCCCTAA GGATGAGAGT GAACAACTTA 002400
002401 CTACCCCACA CTGACACTTC AGTGAGGGCA CTGTGGAACC TTTCTAATCA GAAGATGGGA CCAGGCTTGA CAATGATTCA 002480
002481 ATCAAAGCAG TTTTAGTGTC ACACTTGTCT CATGGAGGCT ATTTGTATTT CTGAAGAAAT TCCAATCAAA TAACAGCTTA 002560
002561 CTAGATTTTT TTCCTGGTCT AAATATTATT TTTGGGCATT TTCCACAAAA AGCTTTTTGG GAAAGGTGGT TCTTACACTG 002640
002641 GGGCTTGGAA TAATTGTATC TCTATGCTTG GCCTTGGAAT AATTCTGTCT CTGTTGGAAT TGTGCACACG TTGAGGCCTG 002720
002721 AGGCCTTATC TTTTATAGGG CCTTCACTAT GTAGCTTCTC ATATATTCAG CATCTTAGGA GAGAATCATA TTCAACATAG 002800
002801 TTTTGCTTTA AGCTTTTTAC TTGGTATCAG CAGTTTTGCC TTAAGTTCTA AAGCTTAATA ATGAAACTCT GTTGAATGAG 002880
002881 AACCTTTCCA AAAGATATAC TTTTCTACAT AAGCTGAGTT TATTCATCCA GAGTCATCAA GAATAGATTA TATTTAGAAC 002960
002961 ATATGGAATG AATAAATATT AGTGAATTCA TCTTTATTGG ACTTTTAAAT TTCTTTACAT ATAATTCCAT TCACTCATTT 003040
003041 ATTCAGCCAT CTACACTTGA GCAACTACTT TATGCCAAGG ACTGTAGTAA ACATTTAGGA TCTGAAGAAA AATATGACTT 003120
003121 GATTACTCTT AAGAATTTTA TAAGTCTAGG CTTTTTTTCA TGTCTGAGGC CAGATTGATT TTTCTTTTCC TTTTTTTCAC 003200
003201 TCAGGATGAA GTACATAGTG GTATAATCCT AGTTGACTGC AGCCTCGAAC TCCTGGGCTC AGGTGATTCT CCTTCCTCAG 003280
003281 CTTCCTGAGT AGCTGGGATA CAAGCCTGTA CCACCACACC TTGCTAATTT TTATTATTTA TTTTCTGTAG AGATGAGGTC 003360
003361 TCTCTATGTT GCTCAGGCTG GTGTCGAATC CTGGCCTCAA GCAATCCTCC TGACTTGGCT TCACAAAGCG ATGGGATTAC 003440
003441 AGGCATGCAC CACCACACCT GGCCTTAGAG TGATTTTTCT TAAGTGCAAA TTCGTGCTCT TTTTTCTAAG GCCTCAGCTT 003520
003521 GGAATGTCCT CTTGTATTAC CCACCTCTCT TCTTTCAGGA CTCATCTCTT AGGAACCTTC CCTGTCCAAG GCAGCTGAGT 003600
003601 ACCCTTCAGT ATACTCATCC TACCCTCCCC CTCTCCTGTT GTGGCAGTTA GTACCATGTT TTGTAACTAC CTGTTTATTT 003680
003681 GGGTCTCCCC AACTAGACTG AAAAAGGCGC TTGAAGGCAG GGCTGTTTCC GTCCTTGTGT CCTGAGTGCT GAGCACAATA 003760
003761 CTGAGTACAG TTTGTGACCT ATAGAATTTG TGGAGGGAAG GCATTTTGGA TGGAGGCTGT TGGTTAAGTG ACCTGCAAAA 003840
003841 CTGCTCCAGT ATCATGCCAG GATCAGTCTT CTTTGCTCAT TATTGATGAG AAGCAACACT AACTTATGTC TTTATTCCTA 003920
003921 ACTTAATTAT ACTCCAAGTA CACATTTGCA TGCTTCATTA CATGCCTGTA GTGATATCAG TGACACTGAT AAAGTATTTT 004000
004001 TTCATATTTT AGTTCTCATG TTTTTGACTC TTTATTTTAA CTTTGTTGTT GATTGAATTG AGTATTTGAG TTGCTGTTAG 004080
004081 TATAAATAAA GTTTCCATCT TGGATGACTT ACCATGTTAA CAAAAAAAAA ATCACAAGCA GTATTATGTG CTAGTGATAC 004160
004161 CTTGTGATTT AAAATGTATT TTGTTCCAGC AAAGAACCAG TTTGGGTCTC TTTGGAGAAT GGGCATACAT CTGAGTTGAC 004240
004241 CTCAACTTTT CTGTAGGAGA GATTATTGAA TCTCCTATAA AGGATTATAT GTAAATATAT AAATTAACAT TTGTCTGTTT 004320
004321 TACAAAATAG AGTGTCTGAA ACAAGAATAC ATAAAATGTT ATTTTCAATG TACTAGAGTA GAGGAGTTTG GTATTTAAAG 004400
004401 GAGTTCTGTA CTTTGGTAAA GCCAAAATTC CTTTGATTAC ACTAGTGGTT GGTTATTTAA TCAGGATGTG AATTCAAATT 004480
004481 GCCTACAAAA TTTTGAAAAA ATGCAGATGT TTGGCTGACT CCACATCTAT CAGATTGCAA TTTCTAGTGG TAGTGTCCAA 004560
004561 GCTCCTATAT ATTTTGTACC AACTACCTGG GTAATTTGAT GGGTTTTCAG AACTACTCAA CTATATAAAC CAAAGAACCT 004640
004641 CAAACCTTAA CATATATATG ATCATGTGGG ACCTTGTTAA AATGCAGATT CTGAGTCAGG AGCTCTGGGT GTGACCTGAG 004720
004721 ATTTTCCAGT TCCAGCGAGC TCCATGTGAT GTCCGTGCTG ATGGTGTGTG ATCCACACTT TGAACAATAA GGCTATAAAT 004800
004801 AATAACCATC TACATTTTAA AAGATTTCCT TTTTTTTTTT TCATTTAAGT GTGGTGTATC TGTTTCCTAC TCTTGCTTAT 004880
004881 TCTATAAGAG AAGTGTAATG GGCTTTAGAT CCAGTCTAAA ATAGTTTTGG TTTGGATATT GTCTTCCATT AAAGTTTCAG 004960
004961 TACGCAGAGG AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 005040
005041 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 005120
005121 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAA
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Predicted Small Protein

Name NONHSAT123138_smProtein_1475:1741
Length 89
Molecular weight 9701.3058
Aromaticity 0.113636363636
Instability index 47.4193181818
Isoelectric point 8.93206787109
Runs 16
Runs residual 0.0504545454545
Runs probability 0.0811473237946
Amino acid sequence MTPGPFSSLAVLLIIRPFVSKVECQTSPHECVTSILNATKNSVIQTYLPFKISSYVLHVS
VVLTPTLPVTYASWNPGKCPNFFLLYSP
Secondary structure LLLLLLLLLLEEEEELLLLLEEEEELLLLLEEHHHHHLLLLLEEEEEELEEEEEEEEEEE
EEELLLLLEEEEEELLLLLLLEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTT
TTTToooooooooooooooooooooooo