NONHSAT123197
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123197 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1071 nt |
Genomic location |
chr7+:128165182..128166252 |
Exon number |
1 |
Exons |
128165182..128166252 |
Genome context |
|
Sequence |
000001 agctgggcga ggtggcgcgc gtctgtaatc ccagctcctc gctaggctga agcaggagaa tctcttgaac ccaggaggcc 000080
000081 caggttgcag tgagctgaga tcgcaccact gcactccagc ctaggcaatg gagcaagacc ccgtctcaaa aaaaaaaaaa 000160 000161 aaaaaaagaa aaagaaaaag CCAGGAGGTG GGCAGTCAGG AGAGGCAGGT GGACCCGGGA GCTGTGGCTT CTTCTACTCA 000240 000241 AGATAGGGAA AGTACAACTC CCCTGGTTAT TATCAGGACC AATTGATTTT GCCTGATCTG AGAAAACATC CTGACCACAG 000320 000321 GTCACTTGAA ATGCCCTGTA ATTCAGAAAC AGTGGCTGTC CACAGCAGAC AGCTATCTGG ATTTAAGACC CCAAATTCAC 000400 000401 ACACCACACC ACAAATTGTC CACTTACAAG CAAAAAATAA CTAACAGCAG CCCCCAACCC ACTCTCATTT TATTCCCTTG 000480 000481 GTTCCAGGTC TCCTCTGAGC AGGTCATGTC TCCCGGTGTG TTTGCGTACA GGCTGTGGGG CTGGGGGGAA GGAGTCTTTT 000560 000561 TTCCTCTTAC CCCAGGCAGG ACTGGCTCCA GGTTGCACAG AGCTCCACAG AGAAAACTGC TCACTGCAGA GAAGGGCAGG 000640 000641 GTCCAGCCCA AGCTCTACTC TGATGAGCTC TGAGATCAGG GGTGGTGACT TCATCTTCTA TCTATGGCTT GGAACAATGA 000720 000721 TGATGACCAT GACCCTCCGG TTTCAGTTCA GTCAATGAAT GGGGAGCAAA TTGCTATTGT CAGGCACTAG GCTAGGGAGG 000800 000801 TGATTCAGAA AGGCTCCCAG AGACCCACAC ACCAATCACT AAACTAATAT AACACGCTAA TGCTACATCT ACAGTAGGGA 000880 000881 TAAAGTGTTT TAGGTACACA AAGAAGGGAG TTGAGAAAAG CTTcagaggt tttcaaagtg gtttccagac catcatcagc 000960 000961 cagcctcacc tggaaagttg gtagaaatac aaatatcagc cccaccccag actggctgaa tcaaaaattc tgggggtggg 001040 001041 gcccagcaat ctgcgtttga acaagccctc c |
Predicted Small Protein
Name | NONHSAT123197_smProtein_662:757 |
Length | 32 |
Molecular weight | 3726.3903 |
Aromaticity | 0.193548387097 |
Instability index | 66.974516129 |
Isoelectric point | 5.82330322266 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0293411058118 |
Amino acid sequence | MSSEIRGGDFIFYLWLGTMMMTMTLRFQFSQ |
Secondary structure | LLLEEELLLLLHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |