NONHSAT123207
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Contents
[hide]Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123207 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1312 nt |
Genomic location |
chr7+:128214770..128266581 |
Exon number |
9 |
Exons |
128214770..128214845,128231904..128232071,128255914..128256024,128257922..128258031,128259100..128259231,128262533..128262748,128263629..128263835,128265851..128265909,128266349..128266581 |
Genome context |
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Sequence |
000001 TCAGGGACCA CTTAATAGTG AGTCTTCCAA CCAGAGCTTG TGTAGCGTCA GATCCTTGAG TGATAAAGGA GTAGAGTGAC 000080
000081 GAGTAGCACA GCCCCTCTAT GGTTTAGATG GCAGTGCTGC AAAGGAGGCA ACAGAGGAGC AGTCTGCTCT GCCAATCCTC 000160 000161 ACGTCAGTGA TGCTAGCAAA ACCTCGGCTT GACACAGAGC AGCTGGCGTA AAGGAGAGCT GGCCTCTGCT TCACTTTTGT 000240 000241 TTCAGCCAAC TGTGATTTGA GACGGCAGAT TGATGAACAG CAAAAGATGC TAGAGAAATA CAAGGAACAA TTAAATAGAT 000320 000321 GTGTGACAAT GAGCAAGAAA CTCCTTATAG AAAAGATGAT GATTATTCCC CACCTTCTAA GAGACAAAGA CCAACGAGCC 000400 000401 ACCACAGCCA CCGGTCCCAG AACCCGCCAA TGCTGGGGAA CGGAAAATGA GGGAGTTCAA CTCTGgccct cacaatccag 000480 000481 tggaggagac GAAACTCAGC TGCCTCTGTC CCTCTGGGCA CGCCTCATGC CAGGTGCATC TGTGGACAGG GGCCATGCTC 000560 000561 CTGGGCTTCC AAAGTTGGAG AAAGCTGCCA GGCTCAGgtc tgaaggccag aattctacag taagtcctac tcagtcaagg 000640 000641 tgggagcagg gtcagtggct tccgaggctc tgcgggagaa tccgtttcct ggccgtggag gtggcctgca ctcctcagct 000720 000721 tgtgctgccc gtctcgaatg actggagttt cctgcttctg tcactacacc tcccaccctc tccatcacct gctctgctct 000800 000801 tataaggatc cgaAGAAATG GAATAATCGT ATCGCTGATC TACGTAAACA AATTGAAGAA TTGTCTGAAA GAAAATATGT 000880 000881 TATGTCTAAA CTGGAAAAGT CCTGTAATCT TATGTTCATG GGCTTTTACA CAATGGAGTT ACTGTTCATC ATGGGGGTAC 000960 000961 CGTGGACAAG CCCAGAGCTG CCGGCGAGTC ATGCCATCCT TACACGTTTC TCCTTGGAAG ACGTGAACTT ATGAATTCAA 001040 001041 CAGGTGAAGA TTTACAACTT GATAAATCAG CTTCATGAGA GCCACCTGAG CTGAAGATTC CCTTGAGAAC AAGTACTGTC 001120 001121 CTGTGGTTTC ATGGCCTTTC TTCCATTTGT GGTTCTTGCG AAGTGGAATT TAAATGACAT CTTATCAAGA TGGATAAACC 001200 001201 CTAGTTTCCC AGTGCTGGAA TATAGAAAAT GGATGGACAA GTAAATCCCA CTCAGCACCC ATAGTCCAGG CATGGGGACC 001280 001281 TCAACACACC TGAGCCCCAG ACATCACCTT TC |
Predicted Small Protein
Name | NONHSAT123207_smProtein_737:1033 |
Length | 99 |
Molecular weight | 11499.3717 |
Aromaticity | 0.112244897959 |
Instability index | 56.9205102041 |
Isoelectric point | 7.71710205078 |
Runs | 13 |
Runs residual | 0.00638947167652 |
Runs probability | 0.0438628673923 |
Amino acid sequence | MTGVSCFCHYTSHPLHHLLCSYKDPKKWNNRIADLRKQIEELSERKYVMSKLEKSCNLMF MGFYTMELLFIMGVPWTSPELPASHAILTRFSLEDVNL |
Secondary structure | LLLEEEEEELLLLLHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHH HHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHLHHHLLL |
PRMN | - |
PiMo | - |