NONHSAT123217

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT123217

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3414 nt

Genomic location

chr7+:128278644..128289065

Exon number

3

Exons

128278644..128281373,128281901..128282358,128288840..128289065

Genome context

Sequence
000001 CAAGGAGCTG GTTATTGGGC TGTCCAGGCC TCCCAAGCAG CACAGAAATG AGGCGAAGGA GTTTTCCTGC TGCTCCACTC 000080
000081 TGTAAGGAGT TAGAGGGTGA TGTTTGCTCG TTTGCAGAGA GAGATGCCTT GTAGGCACCT CAGGATGGAG AGGACCCTGA 000160
000161 TTCCAATGTC Ctttttttct ttagaaacag gaccttgccc tgtcactcag gatggagttc agtggtccaa ttatggctca 000240
000241 ttgtagcctc aaactcccag gctcaagcag tcctaccatg tcagccttcc cagtagctgg gaccacaggt aagcatcgtg 000320
000321 acactcagtg aattttgttt ttattttttt gtagagatgg ggcctcagta tgttgccacg gctgaccttg aactcctgca 000400
000401 ctcaagggat tttcctgccc tggcctccca aagtattggt attacaggca tgagccattg tgcccAccgt ctctggttct 000480
000481 taaccttcta cttccctctt ccagttttaa agaatgcttg taattacatg ggctctccta gatactccag gataatcttg 000560
000561 ttttaaggtc agctgatgag caacattaat tttatctgca ctcttaattc ccccttccta tgtaaTTGTG CTGTGTAACA 000640
000641 TAGGACATGA GCAATTGGTG GGGGTGGGGG TTATTACTTT GGCCACCACA Gtattttatg ccaggtactc agctaagcac 000720
000721 tggtgaatta agcatgaata acacacactc cctaatctcc atccattcat gggaggagCA CCTCACCTGC CATGCTCCTG 000800
000801 AGAATctggg gagtcaaaga agtcttccat gaggaggtga tgccaaagcg gacaagtgac agagtcgaag ctagctagga 000880
000881 agagagtaga ggtttaaggg gaagcgtatt ataagcagag gatatcaccc acttcagaga ctcccagagg agaaagagtg 000960
000961 tgtgttcaaa gggcagatga ggctcagttg gactccatag cagatgaaat ggagaggggc aagcaatgag gctgccttgc 001040
001041 aaggcagggc agagcagggg ctgttgaagg gtttggactt aatccctgag gcaaggagaa gtgatgtaaa tgggggagta 001120
001121 acatgatgag attaatggat tagagacatg gctcaggctg ctgtagagaa ggcaccaggg agagcagatg gCTCAATGGG 001200
001201 TGTGTAGGAG ACCTCTCACT GAGTTTAGGG AGAGGTTTTT AAAACAGAAG AAGTTTGAGT AATTTAAATG ATGATGGGAA 001280
001281 GGAGCTAAAA GTAGGGGATA GGTTAAAGAT ACAGGAAAGT GGGAGGAAGA ACTGACAAGT GAGGTTCCAG AGAGGGCAGG 001360
001361 AGAAGAGGAG ATTCCCATAG GGGGATTAAC ACtttctttt cttttttctt tctaagacag ggtctcactc tgtcgtccag 001440
001441 gctggagtgc agtggcacaa tcttggctca ctgtagtgta ggcttcccag gctcaaggga ttctcccacc ccagactccc 001520
001521 aagtagctgg aactacgggt gtgcaccacc accacacctg gctaatgttt ctttttttgg tagacacaga gtctcactat 001600
001601 tttgcgctga ttggtctcca actcctggcc tcaagcgatc ctcctgccta ggcttcccaa attgctggga ttacaggcat 001680
001681 gagccataat gcctggcctc tgctagttct gtattctcta gagttgtctt tactttgtgc tagcgtgtcc ctcattgtgc 001760
001761 taatcctctg taaaaattaa tacctttttt tcttttcgag atggagtttc actcttgttg cccaggctgg agtgcaatgg 001840
001841 cgctatctcg gctcagcgca acctccacct gccgggttca agcgattctc ctgcctcagc ctcccgagta attgggatta 001920
001921 caggcatgtg ccaccatgcc cagctaattt tgtattttta gtagagatgg ggtttctcca tgctggtcag gctggtctca 002000
002001 aactcctgac ctcaggtgat ctgccttggc ctcccaaagt gctgggatta caggcatgag ccattgtgcc tggccaaaat 002080
002081 taatactttt tatattaaat ttacatatat atacattttt ttctttttga taccgggtct cacactgtca cccaggctgg 002160
002161 agtacagtgg cataacctct gctcactgca gcctccacct gccaggctca agcaattctc ctgcctcagc ctcccgagta 002240
002241 gctgggatta caggtaagtg ccaccacacc cagctgattt ttgtgttttt tgtagagacg aggtttcgcc atgtttccca 002320
002321 gactgttctc aaactcctga gctcaaagca gtccacccac cttggcctcc caaagtgctg ggattacagg tgtgagccac 002400
002401 cttgctcatt ctagtttaaa ctttggagtg gtttgtgtct cctgattgga ctcCTGCAAA TACAGAATTG ATGCTAGGAA 002480
002481 GGGTACCAGG AGATAGACGC ACACAGATGG GATTTGGGAA TAGGTTTGGT TATCCAAGGA GCAGTGCTGA GCTCCTTGCT 002560
002561 AATGGGATAT GGGATGCTGG TGATTTCCAG TAAGTGACCT CAAAATTACT CAGGCTACCA CATACTGTTG ATTGTGATGA 002640
002641 AATGCCAGTT GAAGCACCTG TCCTGCGAGC TTAGGGGTGC TACAAGTTGA CCACTGCAGC AGTAAAGATG ACTCTGAAGA 002720
002721 ATGGCATGGG aactcttggc ctcaagtaat atacctctct cagcctccca aagtgctgag attacaggca taagccacca 002800
002801 ccctcaaccA AGACTTTCTT AAACCAAAAA AAAATTAAGT GAgattactt gagcccaggt ggtcaaggct gcagtgagcc 002880
002881 tgattgcacc actgcactcc agcctaggtg acagaatgag actgtctcaa aaaataaaat aaaataaaat GCAAATTAAC 002960
002961 CCTTTATGAC ATTCGCAGTA ACTTTCCCTC CTAAGTCTTT GAATTCTGTT TAATTTTCAC ATAACATTTA AGATGTTTAA 003040
003041 GAACTTATGT CTGTCTGTGT CATCCCTTTA TGTCAAAAGA TGTCTTTTTG TCACTTCCAG CTGGATCTAC CATGAAAGAC 003120
003121 CTCTGAATCC AGGAAGAGAG ACTGACTGAG CAACATGTTA TTCAGGTACA AAAAGATTTG GACTGTAAag acagggtctc 003200
003201 catctgttgt ccaaggctgg agtgtagtag tgctatcaca gctgactgca gcctcaacct tccaggctga agcgatcctc 003280
003281 ccatctcaac ctcccacgtg gctgagacta caggtgcttg ccactatgcc caactaatat ttggaatttt cgtatacgtg 003360
003361 gattccagag gggtgacagt gaaacgtgag taagcatgga ttttggtata tgca
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Predicted Small Protein

Name NONHSAT123217_smProtein_356:565
Length 70
Molecular weight 7836.0811
Aromaticity 0.144927536232
Instability index 69.0305797101
Isoelectric point 8.76995849609
Runs 13
Runs residual 0.0490744726647
Runs probability 0.0481839305369
Amino acid sequence MGPQYVATADLELLHSRDFPALASQSIGITGMSHCAHRLWFLTFYFPLPVLKNACNYMGS
PRYSRIILF
Secondary structure LLLLEEELLLHHHHHLLLLHHHHHHLLLLLLHHHHHHHHHHHHHHLLLHHHHHHHHHLLL
LLLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLLLLLL
PiMo ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiii
iiiiiiiii