NONHSAT123276
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123276 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
832 nt |
Genomic location |
chr7-:128543623..128546829 |
Exon number |
3 |
Exons |
128543623..128543873,128544109..128544191,128546332..128546829 |
Genome context |
|
Sequence |
000001 GTTGCTTGTC CTCCTATATC ACCTCCCACT CTTCCACTGC CCATCTTCTA CTTCGGAACC CCCTGGCCTG CCTATTCTCC 000080
000081 CTCACCAGTT GCCACATCCA CCTTCCCCCA GTCTTTCCTT CCTCCTTCCT CCCTGAGAAA GTCTTCGGTC TTCTTCCTAG 000160 000161 GATCTCCCCT CTCTGGGGAA TGTGCTGGCA CCTGGAAGAG ATGGTTTCCT AGGGTTAAGA GCATCAGGAG ACGATGGGAG 000240 000241 TGGGGGCGGG ATGTCTCTTT TCTGCCTTTA CACAGAGGGT AGCCCACATC CACAGAGCCA ACTCATCCTC TTGCCCCTAT 000320 000321 GACATGTCCC AGCCTGGGCT GAGGTTTTAC TTCCAGAGGC CCTGCCCTCC AGGAATCTGA TGTCTGTGCA GCCACCTCAG 000400 000401 TCTGCTCCCA CAGGAAGGTA CCATCACTTG CAACCAGAAG CCATGCCCAA GAGGACCCTG CCCTGAGCCA GGAGCATGCT 000480 000481 GCCCGCACTG TAAGCCAGGC TGTGATTATG AGGGGCAGCT TTATGAGGAG GGGGTCACCT TCCTGTCCAG CTCCAACCCT 000560 000561 TGTCTACAGT GCACCTGCCT GAGGAGCCGA GTTCGCTGCA TGGCCCTGAA GTGCCCGCCT AGCCCCTGCC CAGAGCCAGT 000640 000641 GCTGAGGCCT GGGCACTGCT GCCCAACCTG CCAAGGTGAG AGCCCCTGGC CCCTCCCTGG TAGAGCCACA GGTAGGTTGT 000720 000721 CGTGCCATTT CTTGAATTCC AGAGCCCACC TTGCCGGCCT CCAGTGGGTT TGGTCCGTGG Cggagctgga atgcctgagc 000800 000801 tcaaattctg ccattgccac ctagtgcttg tg |
Predicted Small Protein
Name | NONHSAT123276_smProtein_599:823 |
Length | 75 |
Molecular weight | 7925.1206 |
Aromaticity | 0.0540540540541 |
Instability index | 71.9121621622 |
Isoelectric point | 7.60162353516 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0415513552768 |
Amino acid sequence | MALKCPPSPCPEPVLRPGHCCPTCQGESPWPLPGRATGRLSCHFLNSRAHLAGLQWVWSV AELECLSSNSAIAT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLHHHHHHLLLLEEEL LEEEELLLLLLLLL |
PRMN | - |
PiMo | - |