NONHSAT123292

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT123292

Source

NONCODE4.0

Same with

,

Classification

intronic(AS),antisense

Length

1021 nt

Genomic location

chr7-:129007871..129011389

Exon number

2

Exons

129007871..129008735,129011234..129011389

Genome context

Sequence
000001 AAATCCTTCA CATGAAAACA GCTGAGGAGC AGAGGCTCCA GGAGAAGTTT TCCAGTGATT GATGGAACGT AACCTTGAAA 000080
000081 GTCTACCTCG TCAGTTCTTG AGATTGGGGT TCTTCAGGCT TCATCCCGGC TTATTTCCCT GCTGGAAATC AGAGATAGAA 000160
000161 ACAAATGAAG CATCAGGTTG AAAACAGAAG TGCAAAACAG TCACAGGAAA CACAACCCAT ACATCACACC AGCAGCCGGA 000240
000241 GGAAAGCCCC TGCCCACCAG AGATGACCAG GCAACAAGCC CTGGCCAGGC AACTCTCACA CCTTTCCCAG CTTCGTGGAT 000320
000321 AATTAAGAAA CAGTGGTGAC CTAGTACCTA GGAACTAATC AGAACGTAGA GTAATAACTG TTTTTCCAAC CACGGATCTT 000400
000401 GGTAGGAGCT TCTCAGAGGT GATCCTTGTC ACCCGTCAGA AATGGTTGCC TCTCATTATC AAGAAACAGA AGGAGAAACA 000480
000481 AAACGACCAG TGAACTCACC ATCCACTCAG GCATGTGAAA AGCTGAGGTG CCCTCATTAC CGTCCCACTT CTCCATAGTG 000560
000561 CAGGCTTGGG TAAGATATGT CCTGAAGCAA AAGGGAAAGC TGGTTTGGAA ATACTGGGGT TATCTGAGTG CCCCAAAGCA 000640
000641 GACCCAACCC TAGTGAGATT CAGAAGTTCA CAGTGGCTAG CAGAAGCTGC ATCCCTTTTC ACAGCAGCCT CCGATTCAAA 000720
000721 TCAAGAGCAT TAGTCAACTG CCTGACAACC CCTTACTGGC CGGCTTCAAA GCCTTCTGTG TCTGATTTCA AAATCAGAGC 000800
000801 TGATGCAAAG TGCTGCACCC AGGCACTGTG CTTCTCACAG GGCACTCACT GTTTTAATGC TACCCAAACA CTCTACCCGC 000880
000881 ACCTCCCCAG TGGGGACTTT CTGCAGCAAT AGTTGGACTT CCTTCTTTCC CTGTGTGTGA GGCACTTGTG AATTCTCTCC 000960
000961 CACCCTTCAG GACACGTCAC TGGAGGTGCG GATACCAAGA TCAATAAAGA CTGAGGTCAG G
[back to top]

Predicted Small Protein

Name NONHSAT123292_smProtein_164:265
Length 34
Molecular weight 3890.2745
Aromaticity 0.0
Instability index 96.0151515152
Isoelectric point 11.567565918
Runs 5
Runs residual 0.0326086956522
Runs probability 0.0035682741565
Amino acid sequence MKHQVENRSAKQSQETQPIHHTSSRRKAPAHQR
Secondary structure LLLEELLLLHHHLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -