NONHSAT123292
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123292 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS),antisense |
Length |
1021 nt |
Genomic location |
chr7-:129007871..129011389 |
Exon number |
2 |
Exons |
129007871..129008735,129011234..129011389 |
Genome context |
|
Sequence |
000001 AAATCCTTCA CATGAAAACA GCTGAGGAGC AGAGGCTCCA GGAGAAGTTT TCCAGTGATT GATGGAACGT AACCTTGAAA 000080
000081 GTCTACCTCG TCAGTTCTTG AGATTGGGGT TCTTCAGGCT TCATCCCGGC TTATTTCCCT GCTGGAAATC AGAGATAGAA 000160 000161 ACAAATGAAG CATCAGGTTG AAAACAGAAG TGCAAAACAG TCACAGGAAA CACAACCCAT ACATCACACC AGCAGCCGGA 000240 000241 GGAAAGCCCC TGCCCACCAG AGATGACCAG GCAACAAGCC CTGGCCAGGC AACTCTCACA CCTTTCCCAG CTTCGTGGAT 000320 000321 AATTAAGAAA CAGTGGTGAC CTAGTACCTA GGAACTAATC AGAACGTAGA GTAATAACTG TTTTTCCAAC CACGGATCTT 000400 000401 GGTAGGAGCT TCTCAGAGGT GATCCTTGTC ACCCGTCAGA AATGGTTGCC TCTCATTATC AAGAAACAGA AGGAGAAACA 000480 000481 AAACGACCAG TGAACTCACC ATCCACTCAG GCATGTGAAA AGCTGAGGTG CCCTCATTAC CGTCCCACTT CTCCATAGTG 000560 000561 CAGGCTTGGG TAAGATATGT CCTGAAGCAA AAGGGAAAGC TGGTTTGGAA ATACTGGGGT TATCTGAGTG CCCCAAAGCA 000640 000641 GACCCAACCC TAGTGAGATT CAGAAGTTCA CAGTGGCTAG CAGAAGCTGC ATCCCTTTTC ACAGCAGCCT CCGATTCAAA 000720 000721 TCAAGAGCAT TAGTCAACTG CCTGACAACC CCTTACTGGC CGGCTTCAAA GCCTTCTGTG TCTGATTTCA AAATCAGAGC 000800 000801 TGATGCAAAG TGCTGCACCC AGGCACTGTG CTTCTCACAG GGCACTCACT GTTTTAATGC TACCCAAACA CTCTACCCGC 000880 000881 ACCTCCCCAG TGGGGACTTT CTGCAGCAAT AGTTGGACTT CCTTCTTTCC CTGTGTGTGA GGCACTTGTG AATTCTCTCC 000960 000961 CACCCTTCAG GACACGTCAC TGGAGGTGCG GATACCAAGA TCAATAAAGA CTGAGGTCAG G |
Predicted Small Protein
Name | NONHSAT123292_smProtein_164:265 |
Length | 34 |
Molecular weight | 3890.2745 |
Aromaticity | 0.0 |
Instability index | 96.0151515152 |
Isoelectric point | 11.567565918 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0035682741565 |
Amino acid sequence | MKHQVENRSAKQSQETQPIHHTSSRRKAPAHQR |
Secondary structure | LLLEELLLLHHHLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |