NONHSAT123363
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123363 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1723 nt |
Genomic location |
chr7-:130524963..130528484 |
Exon number |
5 |
Exons |
130524963..130525837,130526146..130526344,130527187..130527457,130527763..130527970,130528315..130528484 |
Genome context |
|
Sequence |
000001 ATGGAGGCTG AAGAGACGAT GCAACACCTA CAGGAGTTCC GTGAACGTCA TAACAAGATC CTCGACCAAC TGAATGAACA 000080
000081 GTGAGGGCAG GACCGCTTTA CTGACATCAC CCTGATTGTG GACGGACACC ATCTGAAGGC TCACAAGGCC GTTTTGGCTG 000160 000161 CTTGCAGTAA CTTCTACAAA TTCTTTCCAG AGTTTACCCA AGAACCTTTG GTGGAGATAG AAGGTATTAG TAAAATGGCC 000240 000241 TTTTGCCATT CAATTGAGTT CACATGTACA GCAAAATTAA TGATACAAGG AGAAGCAGCC AGCGATGTAT GGAAAGCAGC 000320 000321 AGAACATCTA CAAATGCTAG AAGCCATCAA AGCCCTTGAA GTTAGGAACA AAGAAAACAC TTCATTAAAG GAAAATACCA 000400 000401 CAGGAAAAAG TGAGGCCAAA AAAAGTAAAA TTGCAGAAAC TTCACGTTAT CGCTGAGTCA CTGCTATCTG CAGAGTCAGA 000480 000481 CTCTGTTGAA ACTGAGGTAG AGAATGCCGA AGACACGACT GAAGCAGAAG ATGAAGGCAT GGAAACATTC GAGGAAGGGC 000560 000561 TTCTGCCCAG CAGTCCATAA AGTACATACA GAGCACAGGT TCCTCTGATG ATTCTGCTCC AGCACTGTTG CCAGATATCA 000640 000641 CCAGCAAGTC CAAGGTGACA GAAAAGGGCA GATTAAAGAG GAAGACAGCT GTGCAATCTG ACCCCACAAG CAAACAGGAA 000720 000721 CACATGAAAT CACACTTCAC TGAGTTTCAA CTGTGAAATA TGCAACAAAA GGTATCTTCA GGAGAGCGCA TGGAAACAGC 000800 000801 ACCTGAATTG TTACCACCTT GAAGAAGGTG GAGGCAGTAA GAAGCAAAaC TGGTGGAAAA ATTCATGTAT GTCAGTACTG 000880 000881 TGAGAAACAG TGTGACCATT CTGGACATTT TAAAGAACAG GTGAAAAACC TTTTGAATAT CCAAATTGTC ATGAACAATT 000960 000961 TGCTAGAAAT AGCCCCCTCA AATGTCACCT CACTGCATGC CAAATGAGTA GGGGCAAAAA AAGGAAGAAA GAAGCTCATG 001040 001041 AGTGCCAGGT CTGCAACAGT GTGTTTAACA GCTAGAACCA GTTCAAATAT CACTCAGTAA TACATACTAG AGGTAAACCC 001120 001121 AACCATTGTA CTTTATGTGA CTTGTGGTTT ATGCAAGGAA ATGAATTAAG GAGGCATCTC AGTGATACAA TATATCAAAG 001200 001201 CGTCTAGTAA TGGGAGAAGT TCTTTCAGCA GAAACACAGG TACAAGCTGA ACCTGTGACA TCAATGATAT TATAGAACAA 001280 001281 GCTGGGAGGT ACACGTGCTC CCACTGTTTC AGGTCCAGGT GGATTCAGCA CAAGCGATCG TGGAACACGT CCACCCAGAA 001360 001361 CCACGCAGGG ATAGCCAGGT GCCCGACACA CAGGAGTGAG CTTCCAGAGC AGGTCCAAGT GAGTTACCTA GCAGTGGGCT 001440 001441 GAATTCAGCC TGAAGAAGGT ACTGAAGTAC ACGGAGAGGA GCCGCATGTG GAACGGGAAA ATCAGATGCC AGTGGAAGTA 001520 001521 CAAAGTGAAC TTCCAGAAGC AGGCTTCGTC CACATGACCC CAGAAATCAT GACCCAAGAG AAGACAGAGC CTAGCCAAGC 001600 001601 AGATGCTGAG GCTGCCAGGG AAGATCACGA AGATGCTGAG GATTAGAGAC CGTGCTGACA GCACATTCTG AAGCTGAAAA 001680 001681 GGCAGAGAAT GAGGGCAGAA CAGCTATGCC AGTTTTAGAA TGA |
Predicted Small Protein
Name | NONHSAT123363_smProtein_1505:1645 |
Length | 47 |
Molecular weight | 5126.4449 |
Aromaticity | 0.0217391304348 |
Instability index | 81.95 |
Isoelectric point | 4.03485107422 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0417013652307 |
Amino acid sequence | MPVEVQSELPEAGFVHMTPEIMTQEKTEPSQADAEAAREDHEDAED |
Secondary structure | LLEEEELLLLLLLEEELLLLLLLLLLLLLLHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |