NONHSAT123377
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123377 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
800 nt |
Genomic location |
chr7+:130600506..130606849 |
Exon number |
2 |
Exons |
130600506..130600891,130606295..130606849 |
Genome context |
|
Sequence |
000001 CCTAAGGCCG TGTTTGAGTT CTGGCTCATC TTTTTTGCTA ATTTGCTCTT ATGCATATCA CCCAACCTCG CTAAGCCAGT 000080
000081 TTCATCATCA GCGAGAACAG CACACTGACA TGCAGGGCCA GCTCAGGCGC TACCACAAGC TACACATCCG TCCATTCGTT 000160 000161 TAATCTTCAC AGCAGCCCTG GAGGTCACCC AGGCATGGAA TGCACAGCTC TGCCAGACAG AAAGCGCTTT GGATGCCTGA 000240 000241 GAAACAACAG CTTGTCCGGG CTACTGATGC GAAGAGAGGC CATGGTTTCC TTTTTCTCTG CTCTGAATGG CAGCCTTGAC 000320 000321 GTCACAACAG CTAGGAACCA CTGGAGGGAC AAATAACAAG GCGCAAGCCA GAAGCGCCCT GCTCTGTCGC AGGGGCAGGG 000400 000401 CCATTTTCAT CCAGTTCTGA TGTCTTCTGT GGCCGCTGCG AGTCGGCGGG AGTAGAGACA AATGACTGGA GCTTTAGGCG 000480 000481 TAAAGGCGGT CTCTCTCTAG GCTGATCAAA CAGCCCTTTG CCCAGTGCTA ATTGCCTTCA CGGAACCTGG ATAAACTACA 000560 000561 GTTCCCGAAT TAAACTTGTT TCTGATGAAC TAGACTTCCC AGGGAATGGG TGTAGTGATT TTGCTGATGG TTCAGACATC 000640 000641 GGCACTTTCC CTGAAGGGCT CAACTTCCTG TGTTTAAAAG CAGACCTAAC AGGGGCTGGC GCATAAGCAT CCCGGGAAAT 000720 000721 ACAAGAAGCT CATGAAAGCA GGCAGCCTTT GCAAGAGACC TGACTTATTT TCTAGGAGAA AAACATCCTT TTAGGGATTT 000800 |
Predicted Small Protein
Name | NONHSAT123377_smProtein_194:355 |
Length | 54 |
Molecular weight | 6073.9489 |
Aromaticity | 0.0754716981132 |
Instability index | 45.9188679245 |
Isoelectric point | 10.0676879883 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.00985439220734 |
Amino acid sequence | MECTALPDRKRFGCLRNNSLSGLLMRREAMVSFFSALNGSLDVTTARNHWRDK |
Secondary structure | LEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |