NONHSAT123844
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123844 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2335 nt |
Genomic location |
chr7+:142569836..142572152 |
Exon number |
1 |
Exons |
142569836..142572152 |
Genome context |
|
Sequence |
000001 CGCCATTGCT GGCCTTTTCC CTTTTCTGCA GCCATGGTGG ATGCCTGGGT CACTGGCCCC TTGGCAGCTA GGCCTCAGAA 000080
000081 AGCAGCAGGC TCTGCCACAG ACTCCCTGGA TGCTTTGGGA AGTCTGAGCT CCAAACGGGA CCCCTTCCTC ACCAGCTCAA 000160 000161 TCAACAAGCA TAGAGCCTAG GGAGCACACA GGCCTCCACA GGGAACCCAG GAGCCGGAAG CTGTCTGAGC AGGGGGATAC 000240 000241 CCTGCCGATG AGGCTTCTCA GGGGACACCT ACCCCCGCAT ATCACTCACC GCAGGAACCA GCGGTCTCCC AGGCCATACT 000320 000321 CCCGTCCGCA GATCCCGGAG CGAGGCCACA GGCAGCGAGG CAGCTTCCGC TCCAGCATCA CCGTGGTGGC CACAATCTGC 000400 000401 GTATGGGAAC AAAAGGAGAA GTCAGAGATG AGGCTGGGCG CAGACAGAGG TAGGGGTAGG GCAGCCTTTG TTGACCTTCT 000480 000481 TCAGTGGGAG AGAGTTGATA GAGCTTGAGA CCAACAATTC TTTACCCAAT GACCCAACAT CCATGACGCA GCCAGGCCAG 000560 000561 AGGCAGGAGA AAGACAGGAA GCAGAAGCCC CATTCCCAGG AGCACAGGCA CCAGAGAAAG CAAATAGAAA GGGCTTTTAA 000640 000641 GGGCTCCCAG ATATTTTGAC CCTACAGACA TAAAGGCCAC TTATAAATAT AAACATCCCA CTTAGAATAT CAATATATAT 000720 000721 TCCTGGAGAA AATATTTTTC TGAGTGAACC TTATTTCCCA GCTTAGTTTT TCCACTCCGT TTTCTACACA GCATAGTTAA 000800 000801 ATGCCTTCCA GTTTGGGAAA TTTCCATTAT TTTGCTGAAA TGATTTTTTT AGATAAATTA TTTTCTAGGT GTTTTTTAAA 000880 000881 TGAGGATTTG ATTCATCTCA TGGTCTTCTC TCCCTATCTT GAAGATCTGG CTGAAGATAG CTTCTGCTAC TATAGGAAGT 000960 000961 TTTGGTGGCA TTACTTTTTT AACACATCCT GCTTTCCATA TCAAATTTTG CAGACTTAAA TATTATCAAG AAGACTTGAT 001040 001041 ACTCCAGTTT TTATTTGGGA ACAAAATGTA CTGAGTGCAA TTTTAGCCAC CGTTAATTTT CTTTTGATTT ATTTCTTGTT 001120 001121 GATTCCTCTA GAAAACACTG AGCTTTTAAC TGTTGAGAAA ACTGTGAGGC ATTCTTCTCA GCGATTCCAG TATTGCCTGG 001200 001201 TTGAATTGCT AATCAGTGCT TCTGTACATT TTGCATGATT TTGCTAGCTT TGCCACAACT GTCCAAACAT AAGTGGGGTG 001280 001281 GAGATATCCT GTCTCTCAGC TTGGCAGGTT CCTTGGTAGG AAGGGGATGA CTTGCCCTAA CCCTCCCTGC CACCAGGGGG 001360 001361 CTCACCTGGG CCCTCCACAG CTCATCCCGC TCATGGGCCA CTCGCCAGTG AGTGTCGCCC ATCATGGCAA TGAGGAGGTT 001440 001441 GAGCATGAGC AGTGTGGCGA TGATGGCAAA GGCAGCATAG GTGATGCTGT ACATGAAGGG CAGGTCCACG TTGTAGTTGG 001520 001521 CTGGGCCATC GATGATGGTA AGGAACAGCT CGAAGGTGCT GAACAGGGCC ATGGGGTAGT CGTAGAAGTG GCCTAGCTCC 001600 001601 TCGGGGTCCT CTGTCTGGAA GATGATATAG AAGGCTGCTC CACCCAAGGG GGTGAGGGTT ACCATGGCAA CCATGCAGAC 001680 001681 GACCAGCCCA CCCCGGGCTC TGCGTGCATG TCCATCCTGG TCCCTTCATC TCAATATCAC CAGCTCTGCA GTGCTCCAAA 001760 001761 CTTTGGGTTT TTACGGTCCC TAGTTTTGTA TGAGCCTCAT CTTGATCCTA AGAGCCACCT CTCCCTAACA CTCCCGATTT 001840 001841 TTCTCACCTC TGGAGGACGT CCCATCCTCT GATACCATAG GTCTCCTCTG ATCTCTGCAT TACTCCTCCT CCCCAAGTTT 001920 001921 AGCCAGAGCC AGTGCCCCCT AGACTTCCTC ATCTCTTCCC TGCCATGGCC CCTGGTCCTG GACAGATGAT TACCTGAAGC 002000 002001 AAAGCCCAGG ATGACCACAG CCATCAGCCA GCAGAATCGC ATCAGGTCGC CAAAAATCAT CTAGAAGGAG CAGGAGGCAG 002080 002081 AGAACATCTG CACACATTCC CCAAGCAATT GCCCCATCCA GCCTCTAACA GGTCTCACCC CGACAAGTCT CACAGCTCCA 002160 002161 CCCTCTGGGA CAGGGATTGG CTATCTATGG CCTGTGGACC AGATCTACCT GACCTGCTTT GGTGTGGCCT TTGAACTGAA 002240 002241 AAGGGTTTCT ACATTTTTTA AAAGGATTGT TAAAAAAGAA GAAAAACATG CAGTGAGGCC ATGTGTGGCT TGCAGAAAAA 002320 002321 AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT123844_smProtein_800:1018 |
Length | 73 |
Molecular weight | 8919.155 |
Aromaticity | 0.263888888889 |
Instability index | 64.9666666667 |
Isoelectric point | 5.00726318359 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0456829378397 |
Amino acid sequence | MPSSLGNFHYFAEMIFLDKLFSRCFLNEDLIHLMVFSPYLEDLAEDSFCYYRKFWWHYFF NTSCFPYQILQT |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHHHLHHHHHHHHLLHHHHHHHHHHHHHHHHHHHHHHH LLLLLLLLLEEL |
PRMN | - |
PiMo | - |