NONHSAT123876
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123876 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1217 nt |
Genomic location |
chr7-:143242279..143243828 |
Exon number |
2 |
Exons |
143242279..143243402,143243736..143243828 |
Genome context |
|
Sequence |
000001 CAAAGTCCAT AAATTATTAG ATAGTCCAGA AAAAATCCTC CTGCAGTTCA AGGACCAGAT AACAGCAGGA AATGCAGTTA 000080
000081 GAAAGAATCA CCTGGTAAAA GCTGCAATCT CAAATAAAAT TACCAGTTGT GTTTTTCAGT TGTTACAGGA AGCAAGTGTC 000160 000161 AAAACTGCTT TCACCAGAAA ATGTGGGGAA ACAGACAGCT TTTGCTGCTC CCGAGTGTGA AATGATTCCA ACTGAATGGG 000240 000241 TTTGCAGAAG AATAGCAACT GATTCTTTTT TCAAAAGAAA TCCTGATGAC AAGGAAGGAT ATAAGTTTTA CCCACCTAAA 000320 000321 GTGGAGATGT TTTTCAAGGA TGATGCCAGT AATGACCCAG AGTCATCTGA GGAACAGCTA ATTGCTCCAA AATTTTGCTT 000400 000401 TGGTGAACTT CTCATAGGCC AAACTGAAGT GGATATCATG TCATATACTA CATAGGCTCT TTTTTGAAAT ACTGGAGAAA 000480 000481 TCTTGGTTGC CCCAGAACTG TATGCTGGTT GATATGAAGA TCAAATTTGG TGTTGATGTA ACCCCTAAAG AAATTGTTCT 000560 000561 TGCTGATGTT ATTGATAATG ATTCCTGGAG ACTCTGGCCA TCAGTAGATG GAAGCCAACA GAAAGACAAA CAGCCTCATC 000640 000641 AGGACCTCAA AGAAGTAACT CCTGAAGGGC TCAAGATGGT TATAGAAAAA CTTAGAGTGG GTTGCAGAGA GAGAAGAGTT 000720 000721 GCTTTTGAAA TTAGAAAGTC CGTGCGGGAT GGCAGTATTG GTAGGCTCTA CTTCTGATCT TGGCCACTGT GAAAAAATCA 000800 000801 AGAAGGCCTG TGGAAATCTT GGCATTTCCT GAGAACTTCA AGTAACATCT GTGCATAAAG GACCAGATAA AACTCTGCGG 000880 000881 ATTAAAGGTG AGTGTGAAGG GGATGGCATT CCCACTGTGT TTGTGGCAGT GGCAGGCAGA AGAAATGGTT TGGGACCAGT 000960 000961 GACGTCTGGG AACACTGCAT ATCCAGTTAT CAGCTGTCCT CCGCTCAAGC AGACTGGGGA GCTCAGGATG TGTGGTCTTC 001040 001041 TCCTCGACTA CCCAGTGGTC TCAGCTGCTC AACCACCCTT TCTCCAGAAG GATCAGCTCA GTTTGCTGCA CAGATATTTG 001120 001121 GGTTAAACAA TCATTTGCTG TGGGGCAGAC TGTGAGCAAG CGTTTTGAAC ACATGGATTT TCTTGAAGCA GGTTGACAAG 001200 001201 GAAATCAGAG AACGTAA |
Predicted Small Protein
Name | NONHSAT123876_smProtein_221:454 |
Length | 78 |
Molecular weight | 8995.0521 |
Aromaticity | 0.142857142857 |
Instability index | 47.6637662338 |
Isoelectric point | 4.46258544922 |
Runs | 13 |
Runs residual | 0.0327498588368 |
Runs probability | 0.0397184514831 |
Amino acid sequence | MIPTEWVCRRIATDSFFKRNPDDKEGYKFYPPKVEMFFKDDASNDPESSEEQLIAPKFCF GELLIGQTEVDIMSYTT |
Secondary structure | LLLLHHHHHHHHLLLLLLLLLLLLLLLEELLLLEEEEEELLLLLLLLLLHHHHLLLLLLL LEEEELLEEEEEEEEEL |
PRMN | - |
PiMo | - |