NONHSAT124007
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124007 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1095 nt |
Genomic location |
chr7-:148972710..148975083 |
Exon number |
4 |
Exons |
148972710..148972934,148973319..148973747,148974239..148974487,148974892..148975083 |
Genome context |
|
Sequence |
000001 ACTGAAGATA TGGCGTTAGG AGCGTCAAGG TTTTCCCCTC AGAAGTTGTC TTTCAAGATA ACTCCATCCC TACGCCTACT 000080
000081 TCTTAGAACC CGTGTCTATA TACATGTTTA ATCAGTGCCC GCCTCCCAGA GTGATCGTAA CCAACCCAGC TGTTAGCAAG 000160 000161 ACTTTCAAAT GGTAAAGCCC CGAAATGAGC ACGACAGTGA GAGTTGACAG AATGCTACCA TCAGAGATGA AATCAGCAAA 000240 000241 TGGCTCACAT CATTTGTCCA CTTGATGCTA AGAGGAATTT GAAATTGGAT GGGCATCAGA TCAGAAGGGA ACAGACAAGA 000320 000321 AACCCAGAAT CATGGAAAAA GTGGCTCTAC CTCCAAACCT GGGTTGGAAT TTACCACGCT GGATCTTCCT AAACTTAAGC 000400 000401 ATCCAGAGAA CAATGCCTTG TCAGAGATAA AAGAACAACC AaaaAAGTAA CCCAAGTGGG GTCCTGTCCA CTCTACCTCA 000480 000481 ACTGAGGTTC TCTTCTAACA GAAGAGGTAA AACCAGCTAG AAGGTTATCA AAAGGTAAAA TAGTGATGAA AAGTAATAAT 000560 000561 CCAATTGAGT CTGTGCCTGC TAACACTGCT ACCGATTCCC CTTTACGTAC GGGAGAGTTA TAAACCAACG GGTTACACTG 000640 000641 CCCCTAAAAA TGTTGCTTTC ATGACAAGCC TAAAGACGGT TGCTTCATCA GCAGATCCTA AAAATTTCAG TGGATCATCC 000720 000721 TCTGAAGTTT CATCTTTGGA TCCTTCCTAC AACAAAGAAA AACACATCAT CCATCCTACT AAACAGCCCC AAGCATCACA 000800 000801 AGGTGGTGAC TGAGCAGGAT GAAGCCTCAA AAAAGAATGA GAAACAGAAC AGTCTAAGTG AAAATATGAA ACAGCACTGG 000880 000881 CAAAGGGGCA GCACCCCCAG GATCAAGCAG CCTGCAAGTC AGCAGTGCTC CTAGTTGGGG CAGTCCTAGG CCTCTCCAAA 000960 000961 AATGCCACTT CCATCAGTTC CATCAGGTGA AGACTCCACG CAGCTCCTTG GCCTCCAGTG CCCCCAGATG AATAAAGGGA 001040 001041 AGCACAGGCC AAGAAGGCAA CCTCATTGAA GATGATTTTG AAAGAACGGC AGGAG |
Predicted Small Protein
Name | NONHSAT124007_smProtein_239:391 |
Length | 51 |
Molecular weight | 5946.7829 |
Aromaticity | 0.1 |
Instability index | 60.538 |
Isoelectric point | 9.74188232422 |
Runs | 8 |
Runs residual | 0.0046783625731 |
Runs probability | 0.0413023317436 |
Amino acid sequence | MAHIICPLDAKRNLKLDGHQIRREQTRNPESWKKWLYLQTWVGIYHAGSS |
Secondary structure | LEEEEELLLLLLLLLLLLLLLLHHHLLLLHHHHHHHHHHHHEEEEELLLL |
PRMN | - |
PiMo | - |