NONHSAT124030

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT124030

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2914 nt

Genomic location

chr7-:149244271..149255869

Exon number

5

Exons

149244271..149246465,149247959..149248037,149248665..149248917,149249892..149250107,149255699..149255869

Genome context

Sequence
000001 CGCCCCAGCA AGCATCCAGG AGAGCCTGCC TCTTGGAATA GAAATCAGAC ATCCCACAGG AACTCTGAGG TTTTCCCACT 000080
000081 GCTGCCAGAT GTATGCAAGG AACACGTGAT CTTCGTAATT CCAGAGCGGG GCAAACTGCT TGGCACCTCT TCAATAGGTG 000160
000161 ACATTCAATG Atagatctct ggcttcctgc tctgtttgtt ctggttgccc tggaaagcct gctgctcagc ccatgccccg 000240
000241 ggacttcctc caccctcacc aggacattct ttccatctct tgtctcctgt gtgcaagtcc ctttctcctg gattccatgt 000320
000321 cttgaatgtt tcttaattta cttcctcatt ttggcagagg atgtcctcca gttgttttct gggaatgCTA ATATGCAAGT 000400
000401 GAACCAGTGA CCTGCAGTTC TGCCCACACA GGGTTAATAA ccaatcagat tctctctttt caagatggtt aacataacag 000480
000481 acaccaagaa agggaagagg agccgacagc agagggggaa gctgaaaaga cgcacaaaga atggccataa AAGATATGAG 000560
000561 TATGTTGAGT GATTAGTGAT CGGAAACTAC GAGTGATATG GTACAGGTGT TTGTAGAAGA ACAGTAAAGC CATTGATCAG 000640
000641 GCAACCCCAG CTTTCCAGAC AGTCACTTTT CCCAGTGGTC ATACCTGGTC TGGAAGATTC CCCATCATCT CGAATAAAGC 000720
000721 TGTTGTTGCT TTTAACTCCA TGGAGAGACC GAATGGAGTG AGCCCAGCAG GGCATGCTGG GCAAGAGAGG TCCCCCGAGT 000800
000801 CCCAAATAAG AATTTCAACT AGTATAAAAC GAGGCAGCGA ACCCACACGT GGAAGTCTGA TACCGCTTGC AGAAGGGAAT 000880
000881 TGAATAGATG TCTCCCTATT GGTAAGGATG TGGTTTTATT GACTTGAAAT AACAAAGCCC GCAAGCAACA ACTGATCATC 000960
000961 CGCGGGATGC TGCCACAAGG AATAATTGAG CACTCATTCA GACACAGGGG AAACCACTGC CTCTTTCAGT CTTTCTCCCA 001040
001041 GATTCCAACA GTCAGTGTTA CAGCATTTCA CCTTGTTCAC CTCCCTGAGA AGACGTTGCA GCTCACTCAC CCCAGTGGGC 001120
001121 ACTGGGAGCC TCTGCTCAGG TGGGAGACAG ATGCCCCCCA CATGCACATC TGGTGTTTAT GAAGCAGATA CTGGGGCTTC 001200
001201 ATAAACACAG AAGGGGCAGG GAAGTAGCCC CAGGGCATAG TGTGGGGCCT CCTGACTAAA AGTAGCTTGC AAACCCCTGC 001280
001281 CTATAACAGC CACTTCCTGG CAGTCATTGT GCCACTTAGG AGCCCTCCTC ACCGCTCTTC CTTTAGTTCC TTCACTCTGT 001360
001361 ATAGACCCTG CCAGAGCAGC TCAGGGTGGA GCAGCTGCAG CCATGGGACC TGCTCCAGGC AAGGCCCTAT GCTACACAGT 001440
001441 CCCTGGGGGT GAGGATTCCA GAGGAGTCAA TTCCCTACCC GCCCTTCCAG GGGATGGCCG AGATGAGCGT TCCCACAGGG 001520
001521 AAAGTGAAAG TTGCAAGGCt gttgcggaaa caccaggggt tccatctagg tcttgctgct catctcacag aaagccagtc 001600
001601 actgagacaa gtattgtcag ggaagaaggc tttatccagg tgctacagac agggtgaaca agagatcagt ctcaaatcca 001680
001681 tcatcatcaa ctgactaaaa ttaggggttt atatagcagg gaagaaatgt aactacatgt gggaaaacag ggattaacga 001760
001761 ggggcaagga agaggagttg gccaacaggc agcaggtggt cacctgggga atcatgatgg gtgaggggtc tggcttctca 001840
001841 ctttccagat gtggggatct ggtaaatttc agtttcttga taccgtctgg gaggattgct ggctggtttc ctgagaaagg 001920
001921 aattcagatg acataaatgt aaatttctcc ttgggtttca agactgagag ggtcaatttc taggtttatt caagaaaaac 002000
002001 cataaacatc agttctatgg gacaattggg cccatttcaA GGCTCTGAGG ATAAGGGTTA ATGAGGGGAC AGAGTCGCCT 002080
002081 GGAGAAGTTC ACTGGGGCCT ACAAGAAACT AGAGAGGCTT CCTGGCAAAG CTCTATGCTG TCTATCCTCT CTTCTCTCCT 002160
002161 TGCAGGAAGA TTCCAGTATA ATAGACCCGA GGTGAAAAGG CTTTTGTTCA ATAAGTAGAA AACTGAAGGG GGGTGggagg 002240
002241 cacatggatt tgaaccagag accgcttggc ctgcaggcaa atgctgtacc ttcagttgca ccccTCACTT GTTACAGCTG 002320
002321 TTTCTGATAA GCACTTGTGC AGCCCCATCA GCACCTCGAT TTCTTCTTGG TGAGTCCATG GGAACAGCCC CACTGCAAAC 002400
002401 AACCCATTCC TGCTCTCCTC TTTCCTCTAA ACCTCAACCT CCTCCTACCT GGCAGTCCAC AGGCCTACAG CTTCTCCTCA 002480
002481 GTGGGAAAGA CATCAGCTTG GAAAACCACT TGGAAAGCCA ACGTTATCCT AGAAAAGCTT TTTAAATGAC CCAgcaggac 002560
002561 aagtctccgg atggccttgg ccaacccggt gcttccctct tttcttggtt gtagttctca gaataactag agaatgtact 002640
002641 gggagtgttg tcctgagata aggaggaact gtcctaaacc tggactctgt tcccatcaca cctagaacag gatgtcctgc 002720
002721 aacgctttag cccaatgatc caagttgccc ttggggtata aaacttgaca gcagagggcg ttcagggtcc ctcagctgca 002800
002801 gtgtgaagtg ggacacacag gtgagactcc atctgccctg ggcaggttcc tgagccttgg gggaccagtt caccctacat 002880
002881 cccaggcttc tgttgtccct tgcctgcctg taag
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Predicted Small Protein

Name NONHSAT124030_smProtein_167:409
Length 81
Molecular weight 8926.524
Aromaticity 0.125
Instability index 54.865
Isoelectric point 3.83416748047
Runs 11
Runs residual 0.00131578947368
Runs probability 0.0428369546017
Amino acid sequence MIDLWLPALFVLVALESLLLSPCPGTSSTLTRTFFPSLVSCVQVPFSWIPCLECFLIYFL
ILAEDVLQLFSGNANMQVNQ
Secondary structure LLLLHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHLLLLEEEEELLLLLLHHHHHHHHHHH
HHHHHHHHHHLLLLLLEELL
PRMN LHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLLLLLLL
PiMo TTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTT
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