NONHSAT124262

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT124262

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

5086 nt

Genomic location

chr7+:151837804..151842813

Exon number

1

Exons

151837804..151842813

Genome context

Sequence
000001 GTGGTGCCCC AGCTGCATCC TCATGAAGCA CATCCGGGAG CACATGGTGG GAAGGGCCAT GTGAGAGACT TTAGTATGTG 000080
000081 AACTGATTTA TCCTCTGAAC AAGCATCTTT GATTATCTGT TCTACTCCAG ATACAACTCA CAAGTGAATG AACCAGAACA 000160
000161 CACAAAAAGT ATGTATGGAG ATCAATAGAG TGTGGTTTAA GAATAAACAA GATCAGTGGA AATGAAGAGA TTCCAAATGG 000240
000241 GCCAGGCGTG GTGACTCATG CCTATAATCC CACCACTTTG GGAAGCCAAG GCAGGCAGAT CCCTTGAGGT CAGGAGTTCA 000320
000321 AGACCAGCCT GGCCCACATG GTGAGACCCC GTCTCTACTA AAAATACAAA AATTAGCTGG GCATGGTGGC GTGTGCCTGT 000400
000401 AATTCCAGCT ACTAGGGAGG CTGAGCCAAG AGAATTGCTT GAGCACCAGA GGCAGAGGTT GCAGTGAGCT GAGATCAAGC 000480
000481 CACTGCACTC CAGCCTGGGC AACAGAGTGA GACTCCAGAG GCTGAGGCAT GAGAATCGCT TTAATCTGGG AGCCAAGATG 000560
000561 GCACCACTGC ACTCCAGTCT GGGTGACAGA GTGAGACTCC ATCTCAGAAA AGAGAAATAG ATCCCTGCAT GTATGAAAAT 000640
000641 CTAACGTACA GTAGTAACTG GTATTAAAAT TCAGTTTATA GTCAAGATTT CGTGGGGTTA GAAGAAAAAG GCCAGGTGCG 000720
000721 GTGGCTCACA CCTGTAATAC CAGCACTTTG GGAGGCAGAG GTGGGCGGGT CACAAGGTCA GGAGTTTGAG GACCAGCCTG 000800
000801 GCCAATATGG TGAAATCCCA TCTCTACTTA AAAAAAAAAA AAAAATTAGC CGGGCATGGT AGTACACACC TGTAGTCCCA 000880
000881 GTTACTTGGG AGGCTGAGGC AGAAGAATCG CTTGAACCTG GGAGGCAGAG GTTGCAGTGA GCCGAGATCG TGCCACTGCA 000960
000961 CTCCAGCCTG GGTGACAGAG GAAGACTCTG TCTCAAAAAA AAAAAAAAAA AAAAAATTCA TGCCAGTCAC GGGGGCTCAT 001040
001041 GCCTGTAATC CCAGCACTTT GGGAGGCCGA GGCAGGTGAA TTGCTTGAGT TCAGAAGTTC AAGACCAGCC TGGACAACAT 001120
001121 GGCAAAACCT CATCTCTAAA TAAATATTTT TAAAAATTAG CCAAGTATTG TGGCATGCGC CTGTAGCCCT GGCTACTCAG 001200
001201 GAGGCTGAGG TAAGAGGATC GCTTGAGCCC AGGAGATCGA AGCTGCAGTG AGCTGAGATT GTGCCACCGC ACTCCAGCCT 001280
001281 GGGCGACACA GTGAGACCCT GTCTCAAAGA AGAAGAAAGA AAATCAGTTA AAAATGAGTG GGTTACTTCT AAATGGCCCT 001360
001361 TCAACAACTG GTTATCCAAT GGAAGAAAGC GAAATTGTAT TTTAAAAATG TTATGCAAGA AAACCTCTAG AATCCGTATA 001440
001441 TAATCTAGGG TCTTGACCAA GACTAGATGC AACAGAAAAT TATGTATGTT TGTTTATATA AACAGTAACT TTTACAAGAA 001520
001521 AAAAGATGTC ACACTTGCTG GTAGGCAAAG GATATTTTGT AGGGGAAAAT TCTGAATAGT GTAAACTGCT AAAAATTGAA 001600
001601 AAATGGACAA AGGATATGAA TACGCAATTC CTATGAAAGC AAATCCAAAT GGCGGACATG AAAAGCTGCC TATTCAATTA 001680
001681 AGGTAACATC AGTCTATATT TATCAGACCA ACTAAACAAA AAAATAGTAA CACCAGCTAC AAATGGGAAA CAAGAAAACA 001760
001761 GTCTCACATG CTGCAGGAAG AAGTGTGCAG TAAGAGACTT TTTAGAAAAC TGGCAATATC TATTTAAATG AAAAGTACAC 001840
001841 ACGCTTTTAC ACAGAAACCT CACGTTTGGG AATATACCCC ATAGGAGTGA AACTATTAAT TCATTGTGAT ATTTGTACAA 001920
001921 GATATAGCAA CACTGTTTGT TATGAGAAAA ATTATAAATC AAATACACAC TCATCAGTAA TGCAATGGTT TAACTGCAGT 002000
002001 TCATCAACAC TATGGAACAT CAGGTAACCA TTCAAAAGAA TGAAATGAAG CTACGTCAGT TGATCGAGAG GGACCTCTGA 002080
002081 TTATTACAGA GAAAAGGAAG ACGGAGAAAA ATAAATATAA CATGATTCCA TTTTTATATA TGTACATAAA AGTGTATATA 002160
002161 GTTCTAAGAT ATTAGCACAG AAAAACAGGA TACATATTAG ATCATCCACG GGATCCCCAG GGAGGTGGAC AGATGGGAGG 002240
002241 GTGGCAGGAT GAAATAAGTA AAGAGACAGA AACCAGAGCT CTCAAAAATG CTTCAGGTTA AAGGTGACAG GTTGAACACA 002320
002321 GTTAAGATAC CCACTAAAAT CACAGTAAAA GCACACTCCT CGAGAACACG AATGGGTATA AGAGTGAATG GACTATTTAA 002400
002401 AATGAAAAGT AATTGACTTA GCAGGGGAAA GCTAGAACTG GAAGGAGTAG AGGCAAAGCA CTAATTCACC CACAGAATCC 002480
002481 GAGAGAGGCT CAACAGAGAG GGGCAACAGC AGAGAAAACA CAGATACTCC ACTCATAATG TAAAAACAAA ATATCAAACA 002560
002561 AGATCAAGAG CAGAAAGGGC TCGTAGCTAA TCTCTAAAAA TAGACAAGAA AGATTAGCAG ATAAAGTAGA GGAAGTCTCA 002640
002641 GAAAGAACAG AGAGACAAGG AAACAAAGAA CAGAAGGGGA GAAAGGATAT AAGACAGAAA TTACTCTCTG ACATGCATGA 002720
002721 GAATCATCCA GGAGGCCCCA CCTCCAGAGC TGGATTCAGT GAGGCTGGGC TGGGGCCCCC GAACCTGCAC ATCCTAACAA 002800
002801 GCTCCCAGGT GACACTGCTG CTTCTAGTCT CAGGTCCACA CTGTGAGATC CTGAATCTCA GGGGTTTTAG TGCAAACACA 002880
002881 GAGGAAACAG AGGGGCAGAA CTTGCAAAAG AATGAATACA AAACACATTT CTCAGACGGA AGGTCACGAT GCTCCAGGTT 002960
002961 GAAAGGGCTC ATCAAGGGAG GAAAGCAATC AACAAAAAGA CCTCCACTGA GGTGTAGTTC TGTGAAATGT CCAAATATCA 003040
003041 ATAAAGAGAA GATCCTACAA ACTTCTAGTG AGGAGTAAAA GGGTTCCAAC AAAGGAACAA GAATCTGAAT GAGTATAGAC 003120
003121 AAAGGAACGC TGATCCAGTT TATAGGGTAA AGATACTTTG CTGGCTGCTG AGAGGGAACT GGATGGGAGG AGACAGCCAG 003200
003201 GCCTGCAGTG GTACAGGCAA GTGATATGTG GCTCAAGATA GGGCTGGTAA ACCTAAGAGT GGATCTGAGA GAATTTTTAG 003280
003281 GAGAAAACAG AACTCGATGA TGCTTTAGGT TTAATCTGGC AGTACTGAGG CCAATGTACA CAAACGGTAA CATCACTCAG 003360
003361 CAAGGAGCTT GTAGGATGGC GGGGTTTAGG AGCTGGACAA GTTTGACAAA GTAAGAGCTT TGTAATTCCA TTCTGAGACA 003440
003441 TCCAAGGAGA AAAATGCTGA ACAGGCATTT GGATATTTGG GTCTGCAGCT CAGGAAGTAT GGACTATAGG TGTAAACTTA 003520
003521 AATGCTTAGC CTATACACGG CCTTACTTGT AAGATATTCC ACAGTCTACC AAAAAACATG CACTGATTTC ATGAAACGGT 003600
003601 AGCTTCCAAA AGATAAGGTA ACTTCCAAAA TTGGTGTACC TTTGGAAAAT ATTTTCATTT GTATTTCTCT CAAGTGCTTG 003680
003681 AAACAGCTCT ACTGAGCACT CCACAAATCC AGTGTGTGCA AATTACAATG CTACCTGCCT CCCAGGAGCT CTCAACAAGA 003760
003761 TGCAAAGATG TGGATTCCAC TGGTCTGCTT TCCCTTTGGG GAAGCCAATC ACCAAGTCCC AAGACTACAT ATTAAATCCC 003840
003841 TAGTGTTACC AAGGGACAGG ATTTGATACG ATTTTGAAAA CACGTTTCTG TCCCTGCAGC TATGTGAAAT CATTTTCACA 003920
003921 TACTGGACAT CAATAGCTTC AGATTGCTAG ACTCCACCCT GTCTCTCCAC TTCCTGTACA CAAAGTATTT CTTCACCTGA 004000
004001 ATCCGAGACC GTGCCAGATA CACATTGGAT TTCCATTCAG TTTTCATCTT CCGGTACTGC GATGACTTGG AGTGAACAAA 004080
004081 CTGTTTACTA TAAGGTGCGT TCAGTTCTCC AGTGACTGTG CTCTGAAATG ACTTTGAGGT GCTGGTGCTG TTTAAGGTGT 004160
004161 GAGGCCTGCA GACAATGGCA TATCAACAGG AAAAAAATAC AAGGAAAACT GAAGATACCT CTGAGTAATG CCCAAAACCA 004240
004241 GGTTAATTCA GATTCTTACT GACAGAAACA TACATGGAAA GCTGCCTAGC AGAGACACAC GGCGAGTTCT CTTATGTAGT 004320
004321 TGGGCACATA CACAGCCAGA CAGCAGGGTT TGTAAGCAGC AGACAAATCA AGCACAGGAA ACCACTAATA CGCCTAGAAA 004400
004401 CCCTGGGCTG TACTATGTGA AGTTAAAACA AAATACCTTA ACACAAACCT CTTGACATGG GCACTCATTT TAGGTTCAGA 004480
004481 ACGGGCACAA CCTGTGGGGT TAACGGCAAG AGGAAGTTCC ATGAGAGGAT TTCGGCCGTA TCGGAAGGTA TAATTTTCAC 004560
004561 ATGCCTCAAC CCCAGGAAGC TGAAAAGAAG CAAAGCAGAC ACAAAGTCAC CCCATCTGAT GGAGACTACA GACAATCTCA 004640
004641 AGCTGGTCAA AGGATGGCCC ACGACAGAAA TAACTCATCA GCGTTTTCCC CGATAATAAA ATGGTCTTCT AGCTTATGTT 004720
004721 AACACTATTG GCCTGCAGGT AGATCTACTT AAATATGAGT ATGCAAATTC AGTTTCAAAG CCAAACTTAG GTAAACCCTG 004800
004801 CCAAATGCTC CTTGAAGAAA AAGATTAGCC CATGCAACAA ACACTGGCTG ACCAATATAC ACGCTTGTGT GATTTCAGGG 004880
004881 CCTGACTGAA ACACACAATA CCCACAAACA CAGGGCATGT AATGATTCGC ATTGAGTTCT TTCCCCTGTA TTAATGCCAA 004960
004961 CTTTTATATC TCTGTCTGGA ATTTTACAAT TAAAAACAGT TAAAAAATCA TCAAAAAAAA AAAAAAAAAA AAAAAAAAAA 005040
005041 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAG GAAAAAAAAA AAAAAA
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Predicted Small Protein

Name NONHSAT124262_smProtein_4127:4261
Length 45
Molecular weight 5238.111
Aromaticity 0.0681818181818
Instability index 48.0113636364
Isoelectric point 9.49786376953
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0413354531002
Amino acid sequence MTLRCWCCLRCEACRQWHINRKKIQGKLKIPLSNAQNQVNSDSY
Secondary structure LLLEEEEELLHHHHHHHHHHHHHHLLLLLLLLHHHHLLLLLLLL
PRMN -
PiMo -