NONHSAT124401

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT124401

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

549 nt

Genomic location

chr7-:155932818..155938324

Exon number

3

Exons

155932818..155933004,155934243..155934364,155938085..155938324

Genome context

Sequence
000001 aaaacattta aaatcaattt ttttttgcaa atttgaaaca caccatgcat tattataaac tacagtcatc aggctatgca 000080
000081 atgcttcact aaaacttgtt ctttttgtct gactgacact gtggacctat tgaccagtgt ctccccagtc cccattctgc 000160
000161 tccccacagc cacagcccct ggtaaccacc ctcctactcc cggcttctac gagttcggca ctttcagatt ccacacccag 000240
000241 AAAACTCCGA CTCCACCAAC ACGAATTAGA AGTGGCAGTC AGAGGACATT GCTATGAGAG GAAGGAGTTC GAGGAGCAGA 000320
000321 GATTATCCCA GCCTGAATGT GCCCTTCGTT GATTTCATGA TGttgcggag gcagaagcct gaggtcaaag tgtggcaatc 000400
000401 acgccctcct ggctgctggg ctgccagagt cctcgcgttc ctgactgcag ctgcaccact tccatctctg tctccattat 000480
000481 cccctgtcca tcttccctct gcctgtgtca cttctcttcc tataaggaca ctcgtcatgt tggattaag
[back to top]

Predicted Small Protein

Name NONHSAT124401_smProtein_293:547
Length 85
Molecular weight 9375.0309
Aromaticity 0.0714285714286
Instability index 84.8273809524
Isoelectric point 11.1857299805
Runs 9
Runs residual 0.0268425841674
Runs probability 0.0452609472218
Amino acid sequence MRGRSSRSRDYPSLNVPFVDFMMLRRQKPEVKVWQSRPPGCWAARVLAFLTAAAPLPSLS
PLSPVHLPSACVTSLPIRTLVMLD
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHHHLLLLLEEEEELLLLHHHHHHHHHHHHHHLLLLLLL
LLLLLLLLLLLLLLLLLEEEEEEL
PRMN -
PiMo -