NONHSAT124461

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT124461

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4049 nt

Genomic location

chr7+:156951686..156985171

Exon number

4

Exons

156951686..156954001,156956324..156956554,156978788..156978902,156983785..156985171

Genome context

Sequence
000001 GATATTAAGT CCGTTATCAA TAGAGTGTGA AATAATCACT CCTGTGAAAG GCGGAGACTT AATTCTCTAG CCTTGTGAAG 000080
000081 TCATGGGCGG TAACTACCAG CACCCACTTC TCCTTCATCC TGAAAGCTTG TAGGTAGGAA AGTCTCTCTC TCCTTGACTG 000160
000161 TTATCTCAAG AAGAGTGTCA CATCTTTGTG GAGTCAAACT TTCACCATGG CATACACACC ATGATTGTGG AGGAAAGAAT 000240
000241 TGTGGAAAAC TTGAAAAAAG TATTTTGAAT ATGGCATTTA CAAAGTTAGG AGTATTTGAC ACAGCAGGCA TGTGGGGAAA 000320
000321 AAAAGAAAAG ATTAAAAAAA AAAAACAGAA TTAGGATTAA AGGTCTCCAT GAATGTTTTC CTAAACCAGT TGGTGGCGGT 000400
000401 GAATGGATAA AGACAGTCTC CCCCTACCCT GTTTTATTAA TATGTGAATA TTACCAAGTA AAAGGACACA TTCAAAAGAT 000480
000481 CAGACTGTGG ATGGTTTCTT GAAGCAAAAG TTTGTTAAAG CAAAATGGCA TTTTGGTTAG GAATTCCTTT TCAGAATCCA 000560
000561 GTTGTATCAG AGAACGTGAT TAAATACCAT TTGCAGCTGG GTGCGATGGC TCATGCCTGT AATACCAGCA CTTTGGGAGG 000640
000641 CTGAGACGGG TGGATCACTT GAGGTCAGGA GTTTGAGACC AGCCTGACCA ACATGGTGAA ACCTTGTCTC TACTAAAAAT 000720
000721 ACAGAAACAG CCGAGCGTGG TGGCACATGG TAATCCCGGC GGCGGAGGTT GCAGTGAGCC AAGATAGCCC CACTGCACTC 000800
000801 CAGCCTGGGC CAGAGCGAGA CTCTGTCTCC AAAAAAATAA ATACCATTTG CTTGCCTGAT CTAATTACAG ACATGTAAAT 000880
000881 CAGAATTCTT TGGTTAATAT CAAAATTTAA AAATAAAACT GTCTAATAGA GCCTAATCTT CCTCTTAAAC TAAGCAGCGT 000960
000961 AGCGTCTCGT ATTCTTTTGT TGTGATTATA AACAGTTTCT TTTACCTTGA GGAATCAAGT TTCAGATAGG ACTTTTTATA 001040
001041 AATAAACTTG TTAGATTTTT ATGTAATTCC GTAGTTACTT TTTTTTTTCT TTTTTTTTTC TGAGATGGAG TCTCGTTCTA 001120
001121 TCACCCAGGC TGGAGTGCAG TGGCATGATT TCGGCTCACT GCAACTTCTG CCTCCCAGGT TCAAGTGATT CTCCTGCCTC 001200
001201 AGGCCTCCAA GTAGCTGAGA CTACAGGTGC GCGCCACCAC GCCCAGCTGA TTTTTGTATT TTTAGTAGAG ACGGGGTTCC 001280
001281 ACCATGTAGG TCAGGCTGGT CTCGAACTCC TGACCTCAGG CGATCTGCCG GCCTTGGCCT CCCAAAGTAC TGGGATTACA 001360
001361 GGTGTGAGCC CCTGCAGCAG CCACTTTCAA ATTTAACTTT AAAAATACAG TTTTCATTGT ATTTAATTTG GGGGGATGCC 001440
001441 TTCTGTTTGT GACCAGTGAT GCTGTTTTTC TGTTTAGTGA TGAAAGATTT CCCCTTAAGA TAAATATATT TAGGTTAAAA 001520
001521 AGAGTCTTTT TGGCAAGACT AACACAATAG TTGATTGTAT CATTTGTATG GTACCAAGTA GTAGTTCATT ATGCCGTTAT 001600
001601 GTTTTATTAC TGAGCCAGTT GATGTCTTAG TTGGTGTCTG CAAAATTTCT CCCCTTTAAA TTTTCTGTCT TTCCCTTGTT 001680
001681 AATTGATCTA TATCTTGAGA GATACTTTGA GACTAGGCAA ATCCTGTTTC TCCTCAAACT TTTGCCCACT AATTTTAGCA 001760
001761 TACATTAGTA GATCTTGTCT GCAGTGTTTT TCTGTTTTCT GCTTTTCTCT TTCCTTCTAC ATTTTTAAAC TGGATTCTGT 001840
001841 GAGGAAAAGA GTTTTCTTTT CCTTGTTTAT TGATTTGGTT ATTTATGTAA GTATTGAGTC CATGATGCGT GTTTGTGCGT 001920
001921 ATAATCCTAT GGATTAAAAT CTAATGCTAT CCTTATTTCG TAACCTTACT GTAATCATGA GAGTATTGGA AAAACCCAAA 002000
002001 TTGAGGGACA GCATCCAGGA CATGAAAGAT GAAGATAAGA ACTCTATAAG ATTGGAGGAA GATTAAGAAG AAATAGTACC 002080
002081 TAAATATAAT GTGGGGTCCT GGATAGGATT CTAGAACAGA TAAACAGCAT CAGTGGGAAA ATTGGTGGAT TTCTAATTAA 002160
002161 GTTTGTAGAT TAGTTAATGT TATTGTATCA GTGTTAATTT CCTGTGGATA ATTGTATCTG CTTAATGTAG AAGTGAGTAA 002240
002241 GACATATGGG ATAAGGGAAA TTGTACCATT TTTGTAGCTT TTCTTTGTCT AAAATTAGTT TCTAAAAGTT TAAAAAGACC 002320
002321 TCTGGGAAAC CATTTAACTT CTTGTGCCTC AGATTCTCTC ATCTGATTAA GTCAAGACAG CTTGTTTGGA TGATCTTTAG 002400
002401 GATCTTTTTT TGGGTGAAAA CATTCTGTAA TTTTTGTATG GGAGTTTTAA AATTGAAATT ATAACCTTAC CTCCTTTTTT 002480
002481 CTCTGTTTGG GTGTAGGAGG AAAAGGCTTC TCTTTTACAT CGTACTCAGG AAGAAAGAAG AAAGAGAGTA TAAAATAGAT 002560
002561 TTGTGTAGCC TTTGATTTTA AAAAATTCGT TAATAGGCTG GGAGCAGTGG CTCATACCTG TAATCTCAGC ACTTGGGAAG 002640
002641 GCTGAGGCAG CTGGATCATT TGAAATCATA AGACACCTAG TTTTATTTCA ACATATGCTT GATTTTTCCA CCAAAAAGTA 002720
002721 GTACAGTGAA GCAGCTTAAT TATGTCTTGT GTTGTTAATC ATTGTGATTT AGATAAACAG CGGTGCGCCT CGAAGCGCAG 002800
002801 TGCTTCTTTT CTGTGCACGC GCGTGTGTAT GTGTGTGTGT AGTGTTTGTT GGTTTTGTCT TTATTTTTGT TTTTGTTTTC 002880
002881 TGAAACAAGG TCTCACTTTG TCACCCAGGC TGGAGTGCCG TGGCGTGATC TCAGCTCACT GAAACCCCGC CTCCCAGGCT 002960
002961 CAGGTGATCC TCCTACCTCA GCACCCTTGA GTAGCTGGGA CGATAGGCGT GCCACCACAC CTGGCTAATT TTTTGTAATT 003040
003041 TTTGTAGAAA CGGGGTTTTG CCATGTTGCC TAGGCTGGTC TCGAACACCT GGGCCCAAGT AATCTGCTTG TCTCAGCCCT 003120
003121 CAGCCTCCCA GAGTGCTGGG ATTGCAGGTG CAAGTCACTG CGCCCAGCCC CTCGTGTGTT TTCTAACCAT TTCTTTGCCA 003200
003201 TGTGTTTTCT AAGAACTGTG GTGTATGTGG TGGGGATGAA TGCTCTTTAG CTCTGAGAGA TTTATAGCTT CATATCTTAT 003280
003281 ACTTTAATAA TTTGGGATAA AATGATTACA CAGATGACTT CAAAGCAGAA AAATACAGAT TTGTTTTTCA TTGTATGTGT 003360
003361 AGAATTAAAT ATATATACCG TCCATGTGTT TGTAAACAAG TTTTTATAAT ATTTTGGAAA AAATATTGAG GATGTGCCTG 003440
003441 GAGAGAGAAG TAAATTTTGT CTATAATTTC ATAGCTGCTT TTATTATCAG TGATATTTTC ATTATAATCA ATAGAATTAA 003520
003521 TAAGCTATTG ATTCATGTTA AAAATTGCAT TCTCTTTCAT GAAGTTCAAA TAACATTGAT GAGCTTTTAA ACATTTCAGC 003600
003601 ACATAGTGAT CTTAAAATTA AATGTATTTT GAAATCCTAT CTAGATTATA AACTAATTTC CACTAGCTGT TGTTAGACAC 003680
003681 ATCAAATAAA TAAAATAGAC TTGCCTTCGT CAGCTTCAGC AATATCATTC ATAGTTCTGA ATCTTCTAAG AATTCTTAGA 003760
003761 ACATTTGTGA ATGATAATTG TTTCCCGGGA AATATGAGTA CACTTGGAAG AAGCATATTC CACCAAAGTG ATTCTAAATC 003840
003841 CCTACCACGT TTTTAAAGTT TTCTTTTAAG CTTGTTAAGA AATAGTAAGA GAAGGGGCTT CCTTTTCGAT CCGCCATCTG 003920
003921 CGGTGGAGCC GCCACCAAAA TGCAGATTTC CATAAAAACC CTTACGGGGA AGACCATCAC CCTCAAGGTT GAACCCTTGG 004000
004001 ATATGATAGA AAATGTAAAG GCCAAGATCC AGGATAAGGA AGGAATTCC
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Predicted Small Protein

Name NONHSAT124461_smProtein_2741:2941
Length 67
Molecular weight 7508.9952
Aromaticity 0.106060606061
Instability index 64.2515151515
Isoelectric point 8.67303466797
Runs 12
Runs residual 0.0312103066594
Runs probability 0.0712403580051
Amino acid sequence MSCVVNHCDLDKQRCASKRSASFLCTRVCMCVCSVCWFCLYFCFCFLKQGLTLSPRLECR
GVISAH
Secondary structure LEEEEELLLLLHHHHHLLLLLLEELLEEEEEEEEEHHHHHHHHHHHHLLLLLLLLLEEEE
EEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
LLLLLL
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