NONHSAT124481

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT124481

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1930 nt

Genomic location

chr7+:157172510..157174439

Exon number

1

Exons

157172510..157174439

Genome context

Sequence
000001 TTTTTTTTTT TTTTGAGATG GACTCATGTT CTGCTGCCCA GGCTGGAGTG CTGTGGTGTG ATCTTAGCTC ACTGTATCCT 000080
000081 CCACCTCCGG GGTTCAAGCA ATTTTCGTGC CTCAGCCTCC TGGGTGGCTG AGACTACAGA TGCCCACCAC CACTCCTGGC 000160
000161 TAACTTTTTT GTATTTTTAG TAGAGACAGG GTTTTACCAT GTTGGCCAGG CTGGTCTCAA ACTCCTGACC TCAAGTGATC 000240
000241 TGCCCGCCTC GGCCTCCCAA AGTACTGGGA TTATAGCTGT GAGCCACTGC ACCCTCCCGG AAATGCTTTT TAACGGTCAC 000320
000321 CTCCTAGGGG AGATGAAGAG AGTTACCGCA TAATCAGTTT TAACTGTATT TGTAATGTTT GTTTCTTTAC CTGGGAGGAT 000400
000401 ATGTTGTAGA TACGTGAGAT AGAATACCTA AGTGACACAA TGGTGTGCAG GCTATGGCTG CAAAGTAGAA AGTTTCTAAA 000480
000481 TAGCATGCTT GGATTTTTAT TTGAATTGGA TGAAGTTTTT GTGTCCTAGA GAAATTCACA AAATGTTCCT AGTTTCAGAT 000560
000561 AAAAGGTTAT GATTTAACAT CTTTGCTTTT GTTCTTTCTT GTCTTTGAAT AGAACAGTGG GGGACGGTAA GGTCTGTTTG 000640
000641 CAAAGTACCT ATGACCATCT TACATTATTT TTATGGGTGG GGGGCATTGA CTGTGGAATG TGGGCAGTAA CTTGCACAGT 000720
000721 CAGTAACCGT TTGAGTAACT TCTTGTTGGC ATCCCCATTC TGGCACTCCT CCTCTAGGTC TCCACCTCAC ACGCTGGTTT 000800
000801 GTGGGCGGAG GGGCAGGTTG GTGCGTGGGG TGTCCGGGCA CTGGCTGTGC ATGCCTTCTT CCTCTTCTGT CTCTTGGCCA 000880
000881 CCTTTTCCAA AAAGTCACCA GTGACCAATT CTCCCAGTGT TTCTTTGGGA CTCAATGCCT TGGGCTTGGC ATTGGGTAAA 000960
000961 GCCAACTGGC CAGTTTCATT CTGACGAGCT CTATAGTAGT CCGGTGTGGA CCTCTGCCCT CCCTGCTCTG CGGAAGCTTC 001040
001041 CTCAGCCTTT GCTTCTCACT ATTTACTATT TGCGGGTCCT GGGGGTACCC AGCGTCTCAG GGTTTTGGCT GCCCACCTGT 001120
001121 ACGTCGGTCC TTTCAAACTG TGGTCAGAGT CAACCTCAGG TGCTGCTTTT CTCTAGTCAC TGCATTTTTT TTTTTTAGTA 001200
001201 GAGACAAAGT CTTGCTGTGT TGTCCAGCCT GGATTCAAAC TCCTGAGCTC AAGGAATCCT CCCACTCAGC CTCCAGAGTA 001280
001281 GCTGGATCAA GTCACTCTTG TTCATAACCT CAGTTGCTTC ATGAATCTCG ATTTCTGCTT GATTTCAGTG CTTGCTGTTG 001360
001361 TATCCTTGTG TGCTGCAGTA TTTATTGTTA ACATTTGTGA CTCAAATGTA TCCACTCCCT GCTTTGGTTG CTCTGGCCTG 001440
001441 CAAGTAGGCC GTACTAATTC TGTAGTTGGT CCTAGCTTGC CTTTGTCTTT ACCTTGCATG CGTTTATGTC TTAATGCACC 001520
001521 TATTAGGATT CCTTGCTTTT ATCACAGGTT TCCCATTTTT CTGAAAAAAT TACAGTAATT ATTAACGCAG AACCCAGGTA 001600
001601 AATTAAAAAG GTTTGTATGC TTTATGAATT TTTAGTAAGT ACTCATTGAT TGATAACAGC AACAGAGGAA AACAAAACGG 001680
001681 TCAGTTCCGA TCTTGATTTC CAGGAGCACT TTGTGTTTCC ACTTGGCAGC GTGATGCTTC CTCATGTCGG TGATTTTCTG 001760
001761 TTGAGACATC TTCAAGCATC ATCTTACGTC TGCTTGTTAA CATTTGTTCA GATTTGATTT CAGCTAATCC TTAAAAGTTT 001840
001841 TTTGAGACAT CAAACTTAGA ATAAAAGGAA TTTCCTTTGC CGAGATTCAT CAGGTATTTA CACTTAGCTT ACATGGCCAC 001920
001921 ACCATTCCTC
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Predicted Small Protein

Name NONHSAT124481_smProtein_17:130
Length 38
Molecular weight 3847.4163
Aromaticity 0.108108108108
Instability index 77.1486486486
Isoelectric point 4.20709228516
Runs 8
Runs residual 0.03644929333
Runs probability 0.0199832185127
Amino acid sequence MDSCSAAQAGVLWCDLSSLYPPPPGFKQFSCLSLLGG
Secondary structure LLLHHHHHLLEEEELLLLLLLLLLLLLLEEEHHHLLL
PRMN -
PiMo -