NONHSAT124481
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124481 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1930 nt |
Genomic location |
chr7+:157172510..157174439 |
Exon number |
1 |
Exons |
157172510..157174439 |
Genome context |
|
Sequence |
000001 TTTTTTTTTT TTTTGAGATG GACTCATGTT CTGCTGCCCA GGCTGGAGTG CTGTGGTGTG ATCTTAGCTC ACTGTATCCT 000080
000081 CCACCTCCGG GGTTCAAGCA ATTTTCGTGC CTCAGCCTCC TGGGTGGCTG AGACTACAGA TGCCCACCAC CACTCCTGGC 000160 000161 TAACTTTTTT GTATTTTTAG TAGAGACAGG GTTTTACCAT GTTGGCCAGG CTGGTCTCAA ACTCCTGACC TCAAGTGATC 000240 000241 TGCCCGCCTC GGCCTCCCAA AGTACTGGGA TTATAGCTGT GAGCCACTGC ACCCTCCCGG AAATGCTTTT TAACGGTCAC 000320 000321 CTCCTAGGGG AGATGAAGAG AGTTACCGCA TAATCAGTTT TAACTGTATT TGTAATGTTT GTTTCTTTAC CTGGGAGGAT 000400 000401 ATGTTGTAGA TACGTGAGAT AGAATACCTA AGTGACACAA TGGTGTGCAG GCTATGGCTG CAAAGTAGAA AGTTTCTAAA 000480 000481 TAGCATGCTT GGATTTTTAT TTGAATTGGA TGAAGTTTTT GTGTCCTAGA GAAATTCACA AAATGTTCCT AGTTTCAGAT 000560 000561 AAAAGGTTAT GATTTAACAT CTTTGCTTTT GTTCTTTCTT GTCTTTGAAT AGAACAGTGG GGGACGGTAA GGTCTGTTTG 000640 000641 CAAAGTACCT ATGACCATCT TACATTATTT TTATGGGTGG GGGGCATTGA CTGTGGAATG TGGGCAGTAA CTTGCACAGT 000720 000721 CAGTAACCGT TTGAGTAACT TCTTGTTGGC ATCCCCATTC TGGCACTCCT CCTCTAGGTC TCCACCTCAC ACGCTGGTTT 000800 000801 GTGGGCGGAG GGGCAGGTTG GTGCGTGGGG TGTCCGGGCA CTGGCTGTGC ATGCCTTCTT CCTCTTCTGT CTCTTGGCCA 000880 000881 CCTTTTCCAA AAAGTCACCA GTGACCAATT CTCCCAGTGT TTCTTTGGGA CTCAATGCCT TGGGCTTGGC ATTGGGTAAA 000960 000961 GCCAACTGGC CAGTTTCATT CTGACGAGCT CTATAGTAGT CCGGTGTGGA CCTCTGCCCT CCCTGCTCTG CGGAAGCTTC 001040 001041 CTCAGCCTTT GCTTCTCACT ATTTACTATT TGCGGGTCCT GGGGGTACCC AGCGTCTCAG GGTTTTGGCT GCCCACCTGT 001120 001121 ACGTCGGTCC TTTCAAACTG TGGTCAGAGT CAACCTCAGG TGCTGCTTTT CTCTAGTCAC TGCATTTTTT TTTTTTAGTA 001200 001201 GAGACAAAGT CTTGCTGTGT TGTCCAGCCT GGATTCAAAC TCCTGAGCTC AAGGAATCCT CCCACTCAGC CTCCAGAGTA 001280 001281 GCTGGATCAA GTCACTCTTG TTCATAACCT CAGTTGCTTC ATGAATCTCG ATTTCTGCTT GATTTCAGTG CTTGCTGTTG 001360 001361 TATCCTTGTG TGCTGCAGTA TTTATTGTTA ACATTTGTGA CTCAAATGTA TCCACTCCCT GCTTTGGTTG CTCTGGCCTG 001440 001441 CAAGTAGGCC GTACTAATTC TGTAGTTGGT CCTAGCTTGC CTTTGTCTTT ACCTTGCATG CGTTTATGTC TTAATGCACC 001520 001521 TATTAGGATT CCTTGCTTTT ATCACAGGTT TCCCATTTTT CTGAAAAAAT TACAGTAATT ATTAACGCAG AACCCAGGTA 001600 001601 AATTAAAAAG GTTTGTATGC TTTATGAATT TTTAGTAAGT ACTCATTGAT TGATAACAGC AACAGAGGAA AACAAAACGG 001680 001681 TCAGTTCCGA TCTTGATTTC CAGGAGCACT TTGTGTTTCC ACTTGGCAGC GTGATGCTTC CTCATGTCGG TGATTTTCTG 001760 001761 TTGAGACATC TTCAAGCATC ATCTTACGTC TGCTTGTTAA CATTTGTTCA GATTTGATTT CAGCTAATCC TTAAAAGTTT 001840 001841 TTTGAGACAT CAAACTTAGA ATAAAAGGAA TTTCCTTTGC CGAGATTCAT CAGGTATTTA CACTTAGCTT ACATGGCCAC 001920 001921 ACCATTCCTC |
Predicted Small Protein
Name | NONHSAT124481_smProtein_17:130 |
Length | 38 |
Molecular weight | 3847.4163 |
Aromaticity | 0.108108108108 |
Instability index | 77.1486486486 |
Isoelectric point | 4.20709228516 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0199832185127 |
Amino acid sequence | MDSCSAAQAGVLWCDLSSLYPPPPGFKQFSCLSLLGG |
Secondary structure | LLLHHHHHLLEEEELLLLLLLLLLLLLLEEEHHHLLL |
PRMN | - |
PiMo | - |