NONHSAT124547
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124547 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
860 nt |
Genomic location |
chr7+:158750374..158751444 |
Exon number |
2 |
Exons |
158750374..158751210,158751422..158751444 |
Genome context |
|
Sequence |
000001 CTGCAGACGC CGAGGCCTGG AGTCCCTGAG CATCGAGCCT CCCCGGGGAG CAAATGCACT CGGCACTCGT GAGGTCCACC 000080
000081 GCCAACTCCA TAACAGCGCT CCTAGGGAAA GAGCAGCGCC GGGCGTGTCA CTTTTTACAC AAGGGCTGTT TAGCTACGTG 000160 000161 CTGTATCAGA CACAGGGGAC CCCTCCCTGC CTGGGGGCTT TAAATGCCAC GCGCTGAGGC CAGCCCTTCC TGACGTGTCA 000240 000241 GCCACTGCCC CCCAGTGTCT GTGGGACCCT GAGGGCCCCT CGGCCTTCCG CTCCGGGGAG CACCTGAAGT GCCTCAATTT 000320 000321 ACTCACTATC TGCCCGTCAG CCACAGCCAC ACCCTAGGTC GTGGAGAGGG TGTGGTCTGC ACCTGCCCGT CAGCCACAGA 000400 000401 CACGCCCCAG GTCGTGGAGA GGGTGAGGTC TGCACCTGCC CGTCAGCCAC AGACACGCCC CAGGTCGTGG AGAGGGTGTG 000480 000481 GTCTGCACCT GCCCGTCAGC CACAGCCTCG TCCCTACTTG ATTTTCGTTG GTGTTGCTTA TGAGGTGCAC CTTGATTCCA 000560 000561 GAAATGTCAA AGCAGCAAAG CCGTGGTTGA AAAGCAGGCA GAAGCCTGTG CCGCGTGGGA GGCTCTGCAG CGCCCGCCCC 000640 000641 ACACCTGGCG TTCCAGCCAC CTACCGACCA GAGATCTGAA GCGTGCGCGT TCTCTCTTCC TCACCGTGGC CGGGGTCCTG 000720 000721 TTCTGTGCGC GGATCAGCTG CTGGTGTCTG CGGGAACACC GGCCCCCGGG CCACTGCGGA GCAGAACGGA TGCTCGTCCT 000800 000801 GGCATCTCCC CGTTTTTGTC TCTTGCCGAC TTGTTCGGAA AATTCAGTCC TGCCGTCTGG |
Predicted Small Protein
Name | NONHSAT124547_smProtein_53:202 |
Length | 50 |
Molecular weight | 5383.3387 |
Aromaticity | 0.0408163265306 |
Instability index | 72.8183673469 |
Isoelectric point | 10.1635131836 |
Runs | 8 |
Runs residual | 0.00121345835632 |
Runs probability | 0.0339714714715 |
Amino acid sequence | MHSALVRSTANSITALLGKEQRRACHFLHKGCLATCCIRHRGPLPAWGL |
Secondary structure | LLLHHHHHHHHHHHHHHLHHHHHHHHHHHLLLHHHEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |