NONHSAT124619

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT124619

Source

NONCODE4.0

Same with

,

Classification

sense

Length

735 nt

Genomic location

chr8-:614622..619277

Exon number

2

Exons

614622..614676,618598..619277

Genome context

Sequence
000001 CAGACGTGTA GACGGGCCAG GGGAGGCGTC CCACCAGACA GACGTGTAGA CGGGCCAGGG GAGGCGTCTC ACCAGACAGA 000080
000081 CGTGTAGACG GGCCAGGGGA GGCGTCTCAC CAGACAGACG TGTAGACGGG CCAGGGGAGG CGTCTCACCA GACAGACGTG 000160
000161 TAGACGGGCC AGGGGAGGCG TCTCACCAGA CAGAGGTGTA GACGGGCCAG GGGAGGCGTC TCACCAGACA GAGGTGTAGA 000240
000241 TGGGCCAGGG GAGGCGTCTC ACCAGACAGA GGTGTAGACG GGCCAGGTTT CCACAGTCGT TCATGCAGTG GTATTTTGTG 000320
000321 CTGAGCTCTG TTCTGATTCT CTCTTCTGGT AGCTTCTCAT CTCCCAGATA TGTCATTCTG TGTGGAAGCG TAGGTTTGAG 000400
000401 ACCTTCCTTA AGAGAGGAAA GCTTATCTTT AGTTTATAGA AATAAAAACA AAACTGTATT TCCAAGCAAA ACTGACTTTA 000480
000481 TGTAGGTGTC TCCAGAGATG CAGCTTCAGC TGCCCTCGCA GATGCCGCTG AGGAGCTGCT GGACCGCCTT GCGTCACACA 000560
000561 GCATGCTGCC CTCAGACGTG TCCATCCTGT ACCACATGAA AACGCTGCTG CTCCTGCAAG ATACTGAGAG ATTGAAGCAT 000640
000641 GCTCTGGAAA TGTTCCCAGA ACATTGCACG ATGCCTCCTG ACCATGCCAG AGTAATCTCA GCTTTCTTTA GTTACTGGAT 000720
000721 CACACATATC CTTCC
[back to top]

Predicted Small Protein

Name NONHSAT124619_smProtein_239:484
Length 82
Molecular weight 9412.8898
Aromaticity 0.123456790123
Instability index 74.1407407407
Isoelectric point 11.4063110352
Runs 14
Runs residual 0.0306597988717
Runs probability 0.0687031569384
Amino acid sequence MGQGRRLTRQRCRRARFPQSFMQWYFVLSSVLILSSGSFSSPRYVILCGSVGLRPSLREE
SLSLVYRNKNKTVFPSKTDFM
Secondary structure LLLLLLLLHHHHHHLLLLHHHHHHHLHHHEEEEEELLLLLLLEEEEEEEELLLLLLLLLL
LLEEEEELLLLEEELLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooo
ooooooooooooooooooooo