NONHSAT124660
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124660 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
889 nt |
Genomic location |
chr8-:1320070..1321387 |
Exon number |
2 |
Exons |
1320070..1320100,1320530..1321387 |
Genome context |
|
Sequence |
000001 GAGTCTTGCT GCGCAGTCAC TCAAGCAAAC GGCAGCAAAT GCAAACGCTC CAACGGCCAA AGCAAATGAG ACCCATGAAG 000080
000081 ACGCCCCCGC CCCACATGCT GGCGCCCCCC CAGGCACGGA GGTCTCGGGG TCATCACTCA CCAGCGAAGC CTCCGCACTC 000160 000161 CAGAAGAAAC AACAGGAGGA ACGTGGGTGT TCTTCAAGGA CGGCTCAACT ATGAGCGAAA CTGTCATCTT GCATAGGTGG 000240 000241 CCACGTAGGT GGCCATAACC CCACATCCCT TCACTGACAC ATGGAATAAC ACACTCAGAG TGCCCCGTAC GGATCTTTAG 000320 000321 ACTGAATCCC TAAGATTTCA CAAGGAAGAA TGAAACACAG CTGAAGGAAT TCTGGCATTG AAATGAATTT GATGTGGCTG 000400 000401 TATCTAACGC CATGTTCGCT TGGGAAAATA TACTGCCTCT ATTGCAGTAC AATTAATAAG AGTTTAATGA TGAAACACTG 000480 000481 GAAATATATC ACAGTTTTAT CTCTCTCTGA TCTTCCTCTA GCCCACGCCG TCCATGTCCA ACTTATTGAA GAGCATTGAG 000560 000561 ATAACTGGCT TTGAATCATC AGACAGGTCA CTCTGGAGAG CGGCTTAAAG TCTTTGCACC TCTTTCACAA AGAgctcctg 000640 000641 gcatctagca ggcagcagcc agtgatgctc ctaaaaccct gcaatacaca agacggtgcc catgaagagg aattatgcag 000720 000721 cccggacgtc aggagagctg agggtgagaa gccctgCTGT GGAGGGGACT CGCACGACAT TTGTCTTCCC CACACCAGGA 000800 000801 GAGGGAGGAG TGAGGGCAAG ACGGTGTCTG CTTTGCTCGC CTGCAGAGTC GGCCCTCGAG AAAAGTGGCA TATTGAAAAG 000880 000881 GGCCCTGCA |
Predicted Small Protein
Name | NONHSAT124660_smProtein_38:235 |
Length | 66 |
Molecular weight | 7591.7517 |
Aromaticity | 0.0153846153846 |
Instability index | 97.92 |
Isoelectric point | 12.2470092773 |
Runs | 7 |
Runs residual | 0.0425961538462 |
Runs probability | 0.0337648572943 |
Amino acid sequence | MQTLQRPKQMRPMKTPPPHMLAPPQARRSRGHHSPAKPPHSRRNNRRNVGVLQGRLNYER NCHLA |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLEEEEEEEEEELEEE EEELL |
PRMN | - |
PiMo | - |