NONHSAT124681
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT124681 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1698 nt |
Genomic location |
chr8-:1709431..1712500 |
Exon number |
2 |
Exons |
1709431..1711094,1712467..1712500 |
Genome context |
|
Sequence |
000001 CGCGCCGCTC AAGGACTCCA AAGTCAGCGT CGCGaatcga catctagagg agtactcacc acttaattga tgatcaatac 000080
000081 acgttccttg aaagaaCCGA TAGCATGCGA TCGATACAGA GCATCTGCAC TGGGATTGTC CGCCCCGCCT GTCAGGGAGG 000160 000161 CCTCGGGGGC TAATGGAGCT GAGGGTATAG TCGGCCTTGG ACCCTCGCTT Ttttcctttc ctgtactatg aagataactg 000240 000241 ccttatctcc ccctcaggac tgttttgggg attaaatagg aCGTTTAAAT TACCAACGCT CTTTGAAATA AACATTTCAA 000320 000321 AATTATTATA ACCCTTTAGT ACATGTGGGA AAACGTTGAC ATTCATGTTC AAGTTTATTT TTCTGCTGGC TCATTTAGGT 000400 000401 TTGTTGAAGC CTTGAGTCCC TAGGATTGTC TAAGAACATG GGTAAATGTG TGTGGAGGCC TCCCTGGAGG CCAGAGAACT 000480 000481 GCCAGCAGCC TTCATGAtgt taggggaaca ggaacctagg agagccaggg tgacatcgtt ttaaaatcaa caacccatct 000560 000561 tGGcgggcgc ggtggctcaa gcctgtaatc ccagcagttt gggagaaaaa aattagccgg gtgtggtggt gggcacctgt 000640 000641 aatctcagct actcaggagg ctgaagcaga attgcttgaa cccaggaggc agaggttgca gtgagctgag atcacgccat 000720 000721 ggcactctag cctgggcaac aagaatgaaa ctctgtctca aaaaaataaa aataaaataa aataaaCTCC ATCTTAAAAC 000800 000801 CAGtgaaacc accattgcaa aattataact gagacagtga gagatctgac ctaaccaact ccatcctact tttaacctcc 000880 000881 aaactgtcct tgttcattcc tgggtgtagg ccaaactaac tttggaagaa acttagttta tggtttcccg aaacaaatcc 000960 000961 ttttcttgtc tggagactag actgcctttg taggactaac aaattagcca caagattaga aattatggtt tagaattcat 001040 001041 gcagctggag attacaagat tctgaccctc cctaaattgc tcctggggat aacatcacta ttgaaaaacc taacaacagt 001120 001121 gcttgagata ttttgcagac cttgcacttg ctgaattagc tgggaccatc cagatggata aactggctca tctgatcttg 001200 001201 tggcccgcac tcagcaaccg gctcaggcca agaggacagc tttgatccat acgatttcat ctctgatctg acccctcagt 001280 001281 gctcccagct tactggcccc ctacctacca aattatcctt aaaaactctg aactccaggg ctgggcacgg tggctcacac 001360 001361 ctgtaatccc aggactctgg gaggccgagg caggcggatc acttgaggtc agaagttcaa gaccagcctg gccaacatgg 001440 001441 caaaaccccg tctctactaa aaatacaaaa attagccagg cgtggtggtg cacgcctgta atgccaacta cttgggagcc 001520 001521 tgaggcagga gaattgcttg aaccctgaag gcggaggttg cagtgtgctg aaatcgcacc actgcactcc agcctgggca 001600 001601 acagagcaag actccatctc aaaaacaaca gcaaaaactc tgaactccga attcttgggg aaattgattt gagtaataat 001680 001681 aaaactctgg tctcccgc |
Predicted Small Protein
Name | NONHSAT124681_smProtein_104:172 |
Length | 23 |
Molecular weight | 2204.5964 |
Aromaticity | 0.0 |
Instability index | 94.5772727273 |
Isoelectric point | 9.00665283203 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0352587882001 |
Amino acid sequence | MRSIQSICTGIVRPACQGGLGG |
Secondary structure | LLLHHHHHLLEELLLLLLLLLL |
PRMN | - |
PiMo | - |