NONHSAT124864
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124864 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1604 nt |
Genomic location |
chr8-:8097136..8099484 |
Exon number |
2 |
Exons |
8097136..8098066,8098812..8099484 |
Genome context |
|
Sequence |
000001 CTTTCCACGG AAAGAGAATA GGTGGGTATT CTCTCTGAAG ACAAATGGTG GAGAGTAGAC TCTCATCAAA GACCCTCTGG 000080
000081 CAGTAATAAG TTGCATTCCA GAAGGTTCCA GAAGGTTCTG TGGAAGGCTG CAGTTTGGGA TTGGTTCTCA GATGTCTGTC 000160 000161 TAACTGCTTT CTAAGGATGA GGACTCCTGG TTTGTGCTTT AGCTACACCC ACAGGAGCAA CAGACTAAGA CATTCCTCCA 000240 000241 CACAATAACA GAACCAGGGA GTGCAGACCA TGTGGGTCTT ACCTGGCCTG TTGTCCACCG TCTGGTTTTA TCTTAGACCG 000320 000321 AGCCTGCTGC AATCCATGTT GTGTATTGGC ACTCCACTTA AGTTTCCTGT TTGTAAAAAG CCCCTTTCAT TCGGTGATTC 000400 000401 CTCAGGGCTT TAGGGGAACT TTCTGGAAAC CAGGCAGAAG GAAATAATGG TGGTTTTGCT GAGGATGGGT GACGTTGGGC 000480 000481 ACGGGACCCA AATGAGTGGT TTGAGCAGAA AGTAGCCTCC ACGCTGGACT AATGCAATAG TCCTGCCATG ATTTCATTGC 000560 000561 AGGGCTGTGA CCGTCTACGA CAAGCTGGCA TCTTTCTTTA AAGAGGCACC TCTGGACCTG CAGCACCGGC TCCTCATGAA 000640 000641 GGTGGGCAGC ACGCACTCTC TGTTCAGGGC CTGAACCTGA GGACCCAGCC ATGGAGCGGT CAGCCTTCAT GGAGCAGGAT 000720 000721 GCTGGGAGCG GGCTGGTGAT GCGTCTCCAT GAGCGGCCAG CCCTGCTGGT CAGCAGCACA CCTGGACAGG TCTGCACGAC 000800 000801 CCCTGGGGCA CTTGGGGCTG GTGTGACGGG CACCTGGCCA ACCTGTGTTC TCCTTACCCC TACCAGTCCT GGATGCCCCC 000880 000881 ACCCCGCCAC GGTCTCAATG AGAAGGGGAG GGTGTGTGAG CTGGAAGAGT GCTGTCTAGA AACAGGCCCC TGACATTCAA 000960 000961 TTCTCTTCTC ATAGAGGACG AAGACTTCTC TATCCTGCTG GCAGCTTTAG AAAGTAGGTG TGTGGCTGCG GTGAGGAGCT 001040 001041 CTGGGCTTGT CCGGGCCACT GAGCTGTGAG CTGCTTGCCT GGCCTGCAAC ATGTTCCTGT CCTGGGCTAC TGGGTGGGGC 001120 001121 AGCCTGGGGA CAGTAGGGGT GGTGGAGGTG GGCCTCCCTG AATCCCCATT TGGGTCATTG AGTGACCAGG CCCTTAGGCT 001200 001201 GAAATGCGCC CTCCAGGAGA GTATCTCACA GAGGCTGGGG GCCTCCCTGC CAGAGCAGTG CACTTTCTCC ACCTGACCAG 001280 001281 GGGACTCTGG CTATTGTTTA TTTAAAAATT TTTTTCTGAA TGGGCATGGT GGCTCACACC TGTAATCCTA GAACTCTGGG 001360 001361 AGGCCGAGGC AGGCAGATCA CCTGAGGTCC GGAGTTCGAG ACCAACCTGG CCAACAGGGC GAAAAGTGTC TCTACTAAAA 001440 001441 ATACAAAACT TAGCTAGGTA TGGTGGTGGG CACCTGTAAT CCCAGCTACT TGGGAGGCTG ACGCACTAGA ATTACTTCAA 001520 001521 CCTGGGAGGC AGAGGTTGCA GTGAGCTGAG ATCACGCCAT TGCATTCCAG CCTGGGTGAC AGAGCGAGAG TCTGTCAGGA 001600 001601 AAAA |
Predicted Small Protein
Name | NONHSAT124864_smProtein_269:412 |
Length | 48 |
Molecular weight | 5228.3061 |
Aromaticity | 0.127659574468 |
Instability index | 58.7682978723 |
Isoelectric point | 9.30230712891 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0327554445201 |
Amino acid sequence | MWVLPGLLSTVWFYLRPSLLQSMLCIGTPLKFPVCKKPLSFGDSSGL |
Secondary structure | LEELLLHHHHHHHHHLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |