NONHSAT124957
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT124957 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1208 nt |
Genomic location |
chr8+:9318958..9320752 |
Exon number |
2 |
Exons |
9318958..9319950,9320538..9320752 |
Genome context |
|
Sequence |
000001 AAATTCTCta tccattagga ttcattttgg cttcaaatga cagaaaatcc aaaataacag tgAAGTTTAG TCCAGCTACT 000080
000081 GTgggactcc taaactctgt tattttgttg ctctgccatc ctcagcaaga ggttcccacc tcatgacaca aaatggctgg 000160 000161 ggagtcttca gccatcacct ttttatttta gcaagtaaga aaaaaggcac aaattcttct tctaaagatg atatccagaa 000240 000241 gttacgaata tcacttttgc atccaccctg tggtagacag actcaaagat ggttctcaaa tatcccaaat acctttctgt 000320 000321 aatcctgtcc cctgtagtgt gggcaggacc tgtgattggt ttctaacaaa ggatctgcta aaggtgatga gatgtgacaa 000400 000401 ttctctccct tgctggctta gatgacctta gctgacatat atgaagaagc ccaggtaaca aggaaccaag catagcttct 000480 000481 agtcagcatc tagcaaaggt cagagaccct caatctgaca gttcacaagg aactgaatcc tgccaacaac catctgagct 000560 000561 tgaaagtgga ttcttcccca gtccaacctc agatgagacc ccagacctaa ctgccacctt gattgcagct ttaagacaga 000640 000641 ggctgaagca gagaatagtt atgtaagtcc agaatcttga cccacagaag tggagataat gaataggttt tgtttaagct 000720 000721 gctattgtga taatattatt actagatacg aatacactct tcattcacca atactgattc acatcgctac acatagctgc 000800 000801 aaaggaagct ggaaagtgta gtcttaattc attggctata tgtaagctaa acatccaaaa ttctactgcc aaggagaaga 000880 000881 gaagaatgga tactgggccc cagccaggga tctgtgcTCC AGCAGACTAA GCAAATAACC AGGAGAAAAA TAAGAAATGT 000960 000961 TATCAGAGGG CTAAGCGCAA TAGAATATTT CAAtcccagc tacttggaag cctgaggcaa aaggatcact tgggcccagg 001040 001041 aggtcagagg ttacagtgag ctgtggtcac gccatcacac tccagcctga atgacagagg aagaccctgt ctcaaTTTTT 001120 001121 TTTAAAGGAC AATGTAAAGA TGCCAAGTGA TGAAAACAGA ATTCAAAAAA CATTGTTTTA AAAAGAATGA ATAGCAATAC 001200 001201 AATAATGA |
Predicted Small Protein
Name | NONHSAT124957_smProtein_227:424 |
Length | 66 |
Molecular weight | 7619.8721 |
Aromaticity | 0.107692307692 |
Instability index | 42.2769230769 |
Isoelectric point | 8.28253173828 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0422285030128 |
Amino acid sequence | MISRSYEYHFCIHPVVDRLKDGSQISQIPFCNPVPCSVGRTCDWFLTKDLLKVMRCDNSL PCWLR |
Secondary structure | LLLLEEEEEEEELLEEELLLLLLLEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLL LLLLL |
PRMN | - |
PiMo | - |