NONHSAT125060
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125060 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
801 nt |
Genomic location |
chr8-:11281452..11332224 |
Exon number |
2 |
Exons |
11281452..11282145,11332118..11332224 |
Genome context |
|
Sequence |
000001 TTTGATCAGA CCATGAAACA TCAGTGGGTT CTTGCAGAAG TGATTTCTCT GTGTGTTCAT CAGTCTGTCC TCTGCACTGT 000080
000081 GGCTTCTCGC ATCTTCCAGG ACCCTAGACG GAGATGCGGC TGCAGGACCA GCAACTGGCC AGACAGCTCA TGCGCCTGCG 000160 000161 TGGCGACATC AACAAGCTGA AAATCGAACA CACCTGCCGC CTCCACAGGA GGATGCTCAA CGATGCCACC TACGAGCTGG 000240 000241 AGGAGCGGGA TGAGCTGGCC GACCTCTTCT GTGACTCCCC TCTTGCCTCC TCCTTCAGCC TCTCCACACC ACTCAAGCTT 000320 000321 ATTGGCGTGA CCAAGATGAA CATCAACTCT CGGAGGTTCT CTCTCTGCTG AGGAGCCCTC AGACTGGGCG GAGGGGCTGG 000400 000401 AGCGGAGGGC TTGGGCTGGA GGGGTGTCAG AGGAAGCTGA GGCCAAGTTA CTCCAGTGGG TCTCCCGGAG GCAGGGGTCC 000480 000481 CTGGGACTGG CGACTCAAGG GCCCCAGGAC CTATTCAGTG GTGCTCTCCC ACCCAGGGGC CCTGGGTGTG GATGCCAGTG 000560 000561 TCTCTGTGAC TGGCTCTTGC TTACTACCCA AAGAGCTCTG CAGAAGGGCC GCTCCAACCA AGATGTTAAA GGAGACCTGG 000640 000641 GTTCCCACCA TAATCCATCC CTCCACGGTC ACGTTCCTGT TTCCTGGAAT CACTGGTGCT ATGAACTGGG ATTCCCAAAG 000720 000721 GGAGGCCCCC CAACAAAGCT GTCATTTTTG CAGAAGGCTG TCCCGCAAGG GCCTTGGGGG AAATTAGGCA TGTCAGATGT 000800 000801 G |
Predicted Small Protein
Name | NONHSAT125060_smProtein_113:370 |
Length | 86 |
Molecular weight | 9966.4957 |
Aromaticity | 0.0470588235294 |
Instability index | 58.8611764706 |
Isoelectric point | 9.01727294922 |
Runs | 11 |
Runs residual | 0.00713012477718 |
Runs probability | 0.0451895746014 |
Amino acid sequence | MRLQDQQLARQLMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADLFCDSPLASS FSLSTPLKLIGVTKMNINSRRFSLC |
Secondary structure | LLLHHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHLLLLLLLL LLLLLLLEEEEEEEELLLLEEEEEL |
PRMN | - |
PiMo | - |