NONHSAT125062
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125062 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1165 nt |
Genomic location |
chr8+:11351678..11367400 |
Exon number |
2 |
Exons |
11351678..11352100,11366659..11367400 |
Genome context |
|
Sequence |
000001 ACCCCAGGAG AAAACTTTCT GGTGACAGAA GGGCATTGTG ACCCACGTTG CCCAGGGCCA GGGACAGGGC AGCTGCTCAT 000080
000081 GGTCCTTCCT CACGAGTTTT CCTGGAGCAG AGGGATACCC CCAAACCCAG GGAGCCCACA GGAGCTTCAG AAGGGCTCGG 000160 000161 CTGGAGGGCG GGGCCCCTGT TGCACTTGCT CACTGGGGAC TGGGGAGGCT CTGATCGCAG ACCGGGGGTG CTGCCACCTC 000240 000241 TGTCTGCTGC CGGCAGAAAG CCACAAGCCA TGAAAACTGA TTGAGATGAG AAGAATTCAT CTGGGACTGG CTTTTGCTTT 000320 000321 AGGATGGTGT TGGAAGTTGC TCGTTGTCGC TAGGAGCCTG CTCCACTGTA AGGGTGTCAG GATCTGAAGA GCTATGGTGA 000400 000401 AACACCACTG AAGCATTGCC AAGGTTACAC CGCACGAAAA GTTGGCAATC CTCTCTCTCG GTGGCTGCTG TGGGAGCAGC 000480 000481 TAACCTCACA GCACCCGAAG GGATGTCATC GGGACCCCAG CTCGGTTTCC AGCATCAGCT GATGCCAGCA AGAAGCCAGC 000560 000561 CAGGCCTGGG GCTTGGCAGC CCAGGGACTT TACCATCCAC CATCCACAGG GCTGTTGCCC TGGACAGGTC ATTGATATCT 000640 000641 GACTCACAGC CAATTCATGG ATGACGTGAA TCCAAAAATC AGAGGCCCAC GTGGATTTAG ACATGGAAAT GCCTCACCAG 000720 000721 CTTCCATGAG CCAGTCTCTG TGCGGCAGAC TTGAACTGCA CGGGGGCTGA TAGGAAGCAG GGTGGGCGCT GGGATGTGAC 000800 000801 TGCGCCCTTG CCAGTGTTTC CAGTCTCCCA GCTCGGGTTC TGTGGTTGTC TAAGCCTGGG GGTGCTCTGC CGGGTCTGTG 000880 000881 GCGACCCGGC TGCCTTTTCA GCCTAATCAC CAGAGAAGCC ACAGAAAGAG CTGGACCACT TAGAGGGGCA GTCTGGCCAC 000960 000961 AGCCACTTGG AAGAACAGGC TGATTTTGTA CAGATGTGTC ATTTTCTCCT GACTTTTAAA CTGTAAACAT TATATAATAC 001040 001041 CCTAGAAAAT TTTGAAAATA GATATAAACC ATCAATAACA CTGGCAACCT AACACTTTTA CCTAAGAGCT ACCCATTTTG 001120 001121 ATTTATCTGA TGCGCAGTTT TCATTGCTGG AATCATAAAG ACATA |
Predicted Small Protein
Name | NONHSAT125062_smProtein_656:769 |
Length | 38 |
Molecular weight | 3949.4207 |
Aromaticity | 0.027027027027 |
Instability index | 46.7081081081 |
Isoelectric point | 9.48992919922 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0180886769122 |
Amino acid sequence | MDDVNPKIRGPRGFRHGNASPASMSQSLCGRLELHGG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHHLLLLLLEEEELLL |
PRMN | - |
PiMo | - |