NONHSAT125115

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT125115

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1914 nt

Genomic location

chr8+:11973291..12424354

Exon number

6

Exons

11973291..11973834,12003148..12003209,12276651..12276793,12277210..12277325,12388452..12388540,12423395..12424354

Genome context

Sequence
000001 ATGCGCGGTC TGCCTCCCGC GGCGGGCCGG GTCTCCAGGG AGGACCTGAG TTTTCTTCAC CCATTGTCAG GGAGGCGCCA 000080
000081 TCGCCCTGGC TTTGGGGCTG GGGCCTCCGG GGAGGTTCCG GTAGGGGCGT TGGAGAGGCC GCTCTTTTTG CAAGGCCCGA 000160
000161 GACGGCGGGC CTTGCGCAGG CCGCCCTATT CCGCGCCCTC AGGGCGTCAG TATCAGCCTG AGGCTGGATA CCCCCGCTGG 000240
000241 GCCCAGATGC CCCCGCTGGG CCCGGAGCAT CCTCCGGCGC TGCCCTCCCA GAGCCACGCA GAGGCTGAGG TGGCGCGGGG 000320
000321 GCGGCCCTGG CTCCGCGAGA AGCGGCGGCA GCGAGGGCTG GAGGACCCGG GCTGCGGGGC TCCGGGGCGT CTGGCCTGGG 000400
000401 TGGGACTGAG CCCATCCAGG GACTGGGACT CCGGGGTTCT GGTGTAGGTG GATCCGGGGC AGGCTCAGGA CCAAGTCCCT 000480
000481 CTCCTTCCAC CAAGGAGCGC CCAGAGGCCG GCGGGAGCTC CAGGTTCACC TCCTCCTCCT CCAGCTTGAC TACAACACAA 000560
000561 ATGAATCCAC TCAAATGTTG GCAAGTGGAG CAGAGTCCCA GAACAGGTGC TGCAGCAGCC CGGCTGGAAG CGATGCAGCA 000640
000641 TCCAGGACGA CGGAGGAAGG GGCAGAGAGG GACCTCTGCT TTCCAGGCTG CCTTTTATAC TGCCTCTGGT CACCTGACGT 000720
000721 GGAACGTACC CTAACCTAAT CAGTTACATG AGGCGCTTGG AAACCACCGT CAATTGGACC GCACTGGGAA ACACAGATGA 000800
000801 ACAAAGTCAA CACCGCTTTG TCCTGCAGTG CCTGGCTCCT TTTTCAGCTC GTCTTGCGAC TCCAGAAACT CCTGGAGGGC 000880
000881 AGAGGCATGC CTGCCATCTT CATCATTGCA TTACCACCAC CCAACACTAT CGGGGGACCT GCCCTGATAA TCAGTCTACA 000960
000961 GGTGTATCCA GCAGCTCCAG AGAGACAGCG ACCAGCGAGA AGGGGCCATG ATGATGGAGG TGGTTTTGTC AAAACGAAAA 001040
001041 TGGGGATATG TAGGGAAAAG AAAGAGAGAT CAGACTGTTA CTGTGTCTAC ATAGAAAGGG AAGACATAAG AGACTCCATT 001120
001121 TTGAAAAAGA CCTGTACTTT AAACAATTGC TTTGCTGAGA TGTTGTTAAT CTGTAGCTTT GCCCCAGCCA CTTTGCCCCA 001200
001201 ACCACTTTGA CCCAATCTGG AGCTCATAAA AACATGTGTT GTATGAAATC AAGGTTTAAG GCATGTAGGG CTGTGCAGGA 001280
001281 CGTGCCTTGT TAACCAAATG TTTGCAAGCA GTATACTTGG TAAAAGTCAT CACCATTCTC TCATCTCAAT AAACCAGGGG 001360
001361 CACAATGCAC TGTGGAAAGC CGCAGGGACC TCTGCCCTTG AAAGCTGGGT ATTGTCCAAA GTTCCTCCCC ATGTGATAGT 001440
001441 CTGAAATATG GCCTCGTGGG ATGAGAAAGA CCTGACGGTC CCCCAGCGCG ACACCCATAA AAGATCTGTG CTGAGGTGGA 001520
001521 TTAGTCAAAG AGGAAAGACT TGCAGTTGAG ATAGAGGAAG GCCACTGTCT CCTGACTGCC CCTGGGAACT GAATGTCTCG 001600
001601 GTATAAAACA CGATTGTACA TTTGTTCAGT TCTGAGATGG GAGAAAAACC GCCCTATGGT GGGAGGCGAG ACATGTTTAC 001680
001681 AGCAATGCTG CCTTGTTATC CTTTACTCCA CTGAGATGTC TGGGTGGAGA GAAACATAAA TCTGGCTTAC ATGCACGTCC 001760
001761 AGTCATAGTA CCTTCCCTTG AACTTCATTA TGACATGGAT TCTATTGCTC ACGTTTGTTG CTGACCTTCT CCTTATTATC 001840
001841 ACCCTGCCCT CCTACTACAT TCCTTTTTGC TGAAATAATG AAGATAATAA TCAATAAAAA CTGAGGGAAT TCAG
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Predicted Small Protein

Name NONHSAT125115_smProtein_560:733
Length 58
Molecular weight 6325.1081
Aromaticity 0.0877192982456
Instability index 46.0949122807
Isoelectric point 11.3648071289
Runs 9
Runs residual 0.00394736842105
Runs probability 0.047527920077
Amino acid sequence MNPLKCWQVEQSPRTGAAAARLEAMQHPGRRRKGQRGTSAFQAAFYTASGHLTWNVP
Secondary structure LLLLLEEEELLLLLHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHLLLEELLLL
PRMN -
PiMo -