NONHSAT125139

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT125139

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3091 nt

Genomic location

chr8+:12245248..12279968

Exon number

4

Exons

12245248..12245374,12245467..12245528,12276651..12276793,12277210..12279968

Genome context

Sequence
000001 AGGCCATTTT CAATCCAGAG GAAGACCTTC TAAAAGAGGT GATGGATGGG AGAGTGCTGA CATACTATGT GAAGCTACTA 000080
000081 TTTGGAGTTG GACACGAGTG CATGTGACCT TGTGCCACAG CGGGAATCTT GACTACCACA CAAATGAATC CATTCAAATG 000160
000161 TTGGCAAGTG GAGCAGAGTC CCAGGACAGG TGCTGCAGCA GCCCGGCTGG AAGCGATGCA GCATCCAGGA CGACGGAGGA 000240
000241 AGGGGCAGAG AGGGACCTCT GCTTTCCAGG CTGCCTTTTA TACTGCCTCT GGTCACCTGA CGTGGAACGT ACCCTAACCT 000320
000321 AATCAGTTAC ATGAGGCGCT TGGAAACCAC CGTCAATTGG ACCGCACTGG GAAACACAGA TGAACAAAGT CAACACCGCT 000400
000401 TTGTCCTGCA GTGCCTGGCT CCTTTTTCAG CTCGTCTTGC GACTCCAGGT ATTGGAGTCC AGGGAGGGGT ACGTCGCCTT 000480
000481 TACCCTGTGC TTGCCACGAT CTTGTCTCCT TAATCCTCAC TGCAGTTCTC TGCCATAGAG TCTTATACTG CTTTACATGT 000560
000561 GGGAAACTGA GGCTCAGAGA GTTTCACAGC AGGGCAGGGA GCCCAGATGT GAATCTGTAG ATACCAAACT TTCTAATTTT 000640
000641 TCAGTAGTTT CCAAGCATCT TTTATTTTTC TTGTTTCTTC GTTGGTGTCT TTTTTTTTTT TTTTTTTTTT TTGAGACAAA 000720
000721 ATCTCTGTGC CCAGGCTGAG GTGCAGTGGT GTGATCTCAG CTCACTGCAA CCTCGACGTC TCACATTCAA CAATTCTCAT 000800
000801 GCCTCAACCT CCCGAGTGGC TGGGACTACA GGTGCCCACC ACACCCAACT TATTTTTGTA TTTTTAGTAG AAACACGGTT 000880
000881 TTGCCATGTT GGCCAGGCTG GTCTTGAACT CCTGACCTCA GGTGATCCAC CCGCCTTGGC CTCCCAATAT GCTGGAATTA 000960
000961 TTGATATGAG CCATTGGGCC CGGTCATGTC ATTGGTGCCT TAACCAAGCC TCTTTTAATT TTTCAAACGG AAGAGCCCCT 001040
001041 GTCCCTCAGT TACGGCTGCT GAGCCCTTTC AAGGTGAGTC AGTGAGGAGG GAGAAAAGCG GAAGTGGTGT GGGAAGAGGC 001120
001121 GGGGTCTGGG CCAGCTGCTG GTCCTGCTCT CCTCCCTCCT TTGGCCTCTA GGCTCCCAGG AGTGGTTTCG AACCTGCGCC 001200
001201 ATGTGCTCTG GAGGCTGTGG CAAGGCAGGC GCGGCTTGGA ACCCGCACCA TGTGCTCTGG GGGCTGTGGC AAGGCAGGGG 001280
001281 CAGCTTGGAA CCTGCGCCAT GTGCTCTGGG GGCTGTGCCA GGGCAGGGGG AGTCCTCGTG TCCCCTGCGC ACAACACAGA 001360
001361 CAGAAGGCTG GGTCCACCCA GTGGGCGGTC GGGTGCCAGG CCAGTGCTTA CCCCGCCATG TTTGCAGCCC GAGGCCAGCT 001440
001441 GGCTGCAGGT GCAGGACTAG GCGTCAGGGG TCAGGGTGCA CACATCCCTG CAGGTCTCGG GGCTCCTGGG TTGCTTCTGG 001520
001521 AAGGGCACAG ATGGGACCTG ACTGGAGCTG CAGAGGGGTG GAGCTTCTGG GGAAAGGATC CCTCCTAGGG GGAGTGTCTT 001600
001601 GGGCCTGGGG CCACGTGGCA GGGACAGAGA CGGGTCCATG GCAGTGTCTG CTCTTCTCTG TGAAGGCAAA AAGCCTCTGA 001680
001681 GGGAGTATTA CAGCCGCCTC ATCCACCAGA AGCATTTCCA GCAGATCCAG GTCTGCACCC CCTGACTGCA GGGCCAAGGA 001760
001761 CTACCCCCGC TTCTAGGTGA GAGGCCAGCA GGAGGCTCAG GGAGGAGGCG GGGCCTTAAG CAGGGGGAGC AGGGGTGGGC 001840
001841 ATGATGTACT TTTTCTGAAA AGGTGGCTCT GGAGGCCACT TGGGGACAGG ACCTGGGCTC TGGCTGAACT CCCGGGAGGA 001920
001921 GGCTACTTCC TGGTGTGCCA GCCCCTCCCT GCCAGGTCGC CCCAGAGGCC CTTTACCAAG GGGTTTGAGG AGGCCACGTC 002000
002001 CTTTCAGTCT GCCACGCCCT CCATTGCATC CTCTTCCTTC CTCCAGGAGG GCTGGGCCTG GGTTTGGGGC CACTGTTGCC 002080
002081 CAGGTGGGGG AGGGCAGTGG CTTTGGGAGG AACAGGGACG ATGTGTCAAA CAGCATCGCC TCTCCCAGTG AGATGGTTCT 002160
002161 CCTTTGCCTC CGTCTCTTTC CCCATTGATT TCTCCAAGTG GGGAGTCATG GCTTGGTCCT GATACGTCTC TAGAGCTGCA 002240
002241 TCTTCCAGCT TCGAGTGAGC AGAGCAGTTG GAGTCTGAGG GCCTTTTCCT GGCAGGATTC TCCAGCTAGT CTTTGTTTTA 002320
002321 GACAGTCTTG CTCCGTTGCC CAGGCTGGAG TGCACGATCT CAGTTCATGC AACCTCCGCC TCCTGGGTTC AAGCGATTCA 002400
002401 CCCACCTCAG CCTCCCAAGT AGATTACAGG ATTACAGGAG TCCACCACAA CAGCTGGCTT ATTTTTGTAT TTTTAGTAGA 002480
002481 GACAGGGTTT CACCATGTTG TCCAGGCTGG TCTTGAACTC CTGACCTCAA GTGATCCTCT CGCCTTGGCC TCCCTAAGTG 002560
002561 CTGGGATTCC AGGCGTGACC CATCATGCCT GGCCCCAGGT AGTCTTTAGA AATGTTAAGC TATTTGGCTT TATTTTCACA 002640
002641 CTGACAGCTG GTTTGTGGTG GGTGTGTTAT GGTTTATTAT TATTATTATT ATTATCATTA TTATTATTTT GAGACGGAGT 002720
002721 TTCGCTCTTG TAGACCAGGC TGGAGTGCAA TGGCGCGATC TTCGCTCACC GCAACCTCTG CCTTCCCAGG TTCAAGCGAT 002800
002801 TCTCCTGCCT CAGCCGCCTG AGTAGCTGGG ATTACAGGCA CATGCCACGG ATTAGCATCG CTAATTTTGT ATTTATTTTT 002880
002881 AGTAGAGATG GGGATTCACC ATGTTGGCCA GGCTGGTCTT GAACTCCTGA CCTCAGGTGA TCCACCCGCC TTGGCCTCCC 002960
002961 AAAATGCTGG GATTACAGGC GGGAGGTGAA CCTGGGAGGT GGAGGTTGCA GGGAGCTGAG ATTGTGCCAC TGCACTCCAG 003040
003041 CCTGGGTGAC AGAGTGAGAC TCTGTCTCAA AACAAAACAA ACAACAACAA C
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Predicted Small Protein

Name NONHSAT125139_smProtein_143:316
Length 58
Molecular weight 6359.1243
Aromaticity 0.105263157895
Instability index 48.3264912281
Isoelectric point 11.3648071289
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0297846866474
Amino acid sequence MNPFKCWQVEQSPRTGAAAARLEAMQHPGRRRKGQRGTSAFQAAFYTASGHLTWNVP
Secondary structure LLLLEEEEEELLLLHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHLLLEELLLL
PRMN -
PiMo -