NONHSAT125240
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125240 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
540 nt |
Genomic location |
chr8-:16107907..16369425 |
Exon number |
5 |
Exons |
16107907..16108001,16113753..16113919,16122682..16122840,16240788..16240836,16369356..16369425 |
Genome context |
|
Sequence |
000001 TTGCAGAACA TATTGATGCT CTGAAAGATA ACCCCAGAAG AGTATGAGGA GACATACACA GTCTACACAG ATTGCCTGTT 000080
000081 TTACTTCTCA CCATTGATTT ATGTTGCCAA AACAAAGAGA ATGCTGAAAG TCACCTGTTC TCCAAAGGTA TGTGCCACCA 000160 000161 AATCAAGGAA AAGCAATAGA AAGCAGCCCC AAAATGAAGA ACCAGGTATC CTTACAGGAA TATAGTGAAC CACAAAGGGC 000240 000241 TATGTGAAAA TGCATTTGCT GCAAGCGGGA ACATCAGGGG AATTTGGTGC CTCCAACCAA GTTAACATAT CTTTCAATCA 000320 000321 CTTGTGATAT TGCAGAATAA TGGCAACTAC CATGGAAAGA TGAAATACAT ATGGTGCTGT AAAAACCAGG AGAGCCCAAG 000400 000401 GGCATTTTGC TCTTGCCATT CCTGAGGAGT TTATTGCCTA CAGATaagcc ctctctttgc ctgctgccat ccacgtaaga 000480 000481 tgtgacttgc tcctctttgc cttctgccat gattgtgagg cctcaccagc catgtggaac |
Predicted Small Protein
Name | NONHSAT125240_smProtein_359:424 |
Length | 22 |
Molecular weight | 2521.9378 |
Aromaticity | 0.142857142857 |
Instability index | 72.6571428571 |
Isoelectric point | 8.49005126953 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0411058116941 |
Amino acid sequence | MKYIWCCKNQESPRAFCSCHS |
Secondary structure | LLEEEELLLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |