NONHSAT125240

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT125240

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

540 nt

Genomic location

chr8-:16107907..16369425

Exon number

5

Exons

16107907..16108001,16113753..16113919,16122682..16122840,16240788..16240836,16369356..16369425

Genome context

Sequence
000001 TTGCAGAACA TATTGATGCT CTGAAAGATA ACCCCAGAAG AGTATGAGGA GACATACACA GTCTACACAG ATTGCCTGTT 000080
000081 TTACTTCTCA CCATTGATTT ATGTTGCCAA AACAAAGAGA ATGCTGAAAG TCACCTGTTC TCCAAAGGTA TGTGCCACCA 000160
000161 AATCAAGGAA AAGCAATAGA AAGCAGCCCC AAAATGAAGA ACCAGGTATC CTTACAGGAA TATAGTGAAC CACAAAGGGC 000240
000241 TATGTGAAAA TGCATTTGCT GCAAGCGGGA ACATCAGGGG AATTTGGTGC CTCCAACCAA GTTAACATAT CTTTCAATCA 000320
000321 CTTGTGATAT TGCAGAATAA TGGCAACTAC CATGGAAAGA TGAAATACAT ATGGTGCTGT AAAAACCAGG AGAGCCCAAG 000400
000401 GGCATTTTGC TCTTGCCATT CCTGAGGAGT TTATTGCCTA CAGATaagcc ctctctttgc ctgctgccat ccacgtaaga 000480
000481 tgtgacttgc tcctctttgc cttctgccat gattgtgagg cctcaccagc catgtggaac
[back to top]

Predicted Small Protein

Name NONHSAT125240_smProtein_359:424
Length 22
Molecular weight 2521.9378
Aromaticity 0.142857142857
Instability index 72.6571428571
Isoelectric point 8.49005126953
Runs 5
Runs residual 0.00816326530612
Runs probability 0.0411058116941
Amino acid sequence MKYIWCCKNQESPRAFCSCHS
Secondary structure LLEEEELLLLLLHHHHHLLLL
PRMN -
PiMo -