NONHSAT125438
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT125438 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
481 nt |
Genomic location |
chr8+:21778967..21824500 |
Exon number |
3 |
Exons |
21778967..21779137,21821660..21821836,21824368..21824500 |
Genome context |
|
Sequence |
000001 ATGCAGAGGG AGTCAGTACT TTTATGAATA TACATCGTGC TATTTGCTGT TTCCCGTAAA GAAATATCTC TTAATGTGAT 000080
000081 CTCCCACATT TTCGAAGCAT AAAGGTTGTC ATTCCTGTGA AAGTCAGGAT GCATCAAAGC AATCTTCACA GCATTTGTCG 000160 000161 CTCCAACGAA GCGAGACAAG AAGTTTCTCC ATGGATTATA GGCAATTTTT CAGGAACAGA AAATAGACAT TCTTCTCTGG 000240 000241 AGGATTTTCT CTGACCAAAG TGGCATCAAA GAATAGATAT CCTTAATAAG AACTGGCGAC TAGGAAAACA TTGGACATAG 000320 000321 ATGTTATCAT GCCAAGGAGA GTGCTGTGAG CCTGGCCCAA CTAGAGAATC TGTGCAAACA GCTGTATGAA ACCACAGACA 000400 000401 CAACCACTCG ACTCCAGGCA GAGAAAGCCT TGGTTGAATT TACCAACAGC CCTGATTGCC TGAGCAAGTG CCAGCTACTC 000480 000481 C |
Predicted Small Protein
Name | NONHSAT125438_smProtein_128:253 |
Length | 42 |
Molecular weight | 4728.1162 |
Aromaticity | 0.0731707317073 |
Instability index | 73.7146341463 |
Isoelectric point | 5.77313232422 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0350392409216 |
Amino acid sequence | MHQSNLHSICRSNEARQEVSPWIIGNFSGTENRHSSLEDFL |
Secondary structure | LLLLLLLLLLLLHHHHHHLLLEEEELLLLLLLLLLLHHHLL |
PRMN | - |
PiMo | - |