NONHSAT125756

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT125756

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1793 nt

Genomic location

chr8+:28558990..28611207

Exon number

4

Exons

28558990..28559176,28570974..28571067,28573102..28573583,28610178..28611207

Genome context

Sequence
000001 TTTCCGGCGC GGCGCCCTTC GGCAAGTTCC GCAGTCGCCT GTCGGAAATG GCTGCCGGCC GGCAGGGGGA GCGGCGGATC 000080
000081 AGGCGCGGCC TGGAAGGCGG GCGGCCGGCA GCCAGAACGG CTTCTGGGAC GCCGACTTTC GCGCAggcgg cggcggcggc 000160
000161 ggcggcggGT CCCTGAGCTG GAAGCCGGAG AGCAAGCCCT GGAGGTTCAC TCTTTCAAGA AGTCGTGTGC TGAGGTGTAA 000240
000241 TGCTACACAA GTCAGAGGAA GGAAGGGTCC TGAAACACAT GGCCTGATTG TTGGCAAAGG CATCATAAGA AGCTGGCATT 000320
000321 TATTTCTGTT CTAACCTATT ACTGTATAAC TGTGAATAGA CACTATGCAT ATTTGTTGGT CAGCAAAACC AAGAAACAAG 000400
000401 AGCTATGGCA TTTGAAAAAG TCTGTCTGAT TCCAGGGTGT TTTTCCTGGG TTTCATCATC AGGTACCTCC TCCCTTTCAT 000480
000481 CTCAGCAAGA ATGTGGCACC TTTTATCGTT TGATAAAGAT TAAGGACATG TTCTTTGGTC AACAGCCAGA ACTTAAAATC 000560
000561 TGCTGGAATA GGGTCAGAGA CCATTTCAGC TGCAGCTGAG GAAAATGAAA TGTTCATTTT ATTTGGTGCC TTGTCTGGGG 000640
000641 AGCACACTAA CTCTTCTGGA AACGTGTCAG TGAAACAGAG ATCGTTTTGT GGAATAGCAA CCCATGGTTA TGGCGAGTGA 000720
000721 CCCGACGTGA TCTGGGGGGC AGGCTGCAGA GGACTCATGA CAGCCTGTAG CTCCCCTGCT GAGGCAGTGT GGTTATGTTC 000800
000801 CCAGCAGTGG GGGTCAGACG CCCTTCCTCA GAACTTTCTA GTTGCCCTCT ACCTGACTCC TGACTTGTAT TCCTTTTAGC 000880
000881 AGTAGCCTTC TTCCCTCGGG GAGCCAAAGA GTGTGGTGTG TGGCGCTATA TTGTGGCTGC TATTTCATCT GGTTTCTTTT 000960
000961 AATGTGAGGA ACTCACATAC TGACTTCAGT GGGACTCGGT GAGCCGGGGC CGTCTGTGTG GTGGGACCCC CTTTAGCGGG 001040
001041 ACTCAGTGAG CTGGGGCCGT CTGTGTGGTG GAGCCAGGGC CTCTCCCTTT AGTGGAGCCA GGTTGTCGGG CCCCGAATGT 001120
001121 CACTGGTGGA TCTAAGAAGG GCTGAGTGGT CTGACACCAA AACATGCCGC AGGGAGGGCT GTGGTGCCGG TGCTTCCAAC 001200
001201 AAGGACAGCC CTCCTTGACC CTGAAAGGAA CACTGGCTTG AAGGACTGCA GACAGGCTCT GAGGGGCACG CCCTCCTCAG 001280
001281 CGAGAGGCAG CAAGGTGGCC ACAGTGTCAC TGGTCAGGTG CTTCTCACCA CGGGAAAGCC GCCGACCTGT GACTCGCTTG 001360
001361 AGATGGGAAA GCGGCGCCAC AGACCCCGGG TCTCCTTGGC TGTCTGTGGG CCGCCCCTGG CCACCTTGTC CTGGCTCGCA 001440
001441 GGGTGCAGGA GCGCCTCGTT CTCTGGGTGG CCGGCTTGCT GCTCCGGTTT GGGCTGTCTT ACCATAACAC CGTCCCAGGG 001520
001521 CTCTGCAGGC CACTGTGAGC GCTGGCTCCC TGGGCAGTGC TCCTCCGTGT GGACTGTGCC TCAGGCCAGG GCTCACCAGC 001600
001601 TGGGGTCCTG TCCGGAAGGA TGGGATCTTT CTGGGAGCTG CGCCGGACAG AGTGGGGAGC TCCTAGTTTG TGGGGGGAAG 001680
001681 CTTTGATATC CATGCCACGT CCATCCACCC CACCCCTTTT CGTCACGAGC ACAATGGTCT TACATTGGAT TTTTGTAAAA 001760
001761 AAATAAAAAT AAATGGAGAC TTTAACTCAA GCA
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Predicted Small Protein

Name NONHSAT125756_smProtein_404:598
Length 65
Molecular weight 7346.4275
Aromaticity 0.140625
Instability index 52.53921875
Isoelectric point 8.36090087891
Runs 12
Runs residual 0.03890625
Runs probability 0.040408055114
Amino acid sequence MAFEKVCLIPGCFSWVSSSGTSSLSSQQECGTFYRLIKIKDMFFGQQPELKICWNRVRDH
FSCS
Secondary structure LLEEEEEELLLLEEEEELLLLLLLLLLLLLLLEEEEEEEELLEELLLLLEEEEHHHHHHH
HLLL
PRMN -
PiMo -