NONHSAT125819
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125819 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
469 nt |
Genomic location |
chr8-:29379949..29380417 |
Exon number |
1 |
Exons |
29379949..29380417 |
Genome context |
|
Sequence |
000001 GGCTCGGCTT CCTGAGTCAG CACACTCTCC TCTCCATGGA GCAGATGGGC CAACCCTCCG GGAAAGGAAG CTCTTCTAAG 000080
000081 ATCCTCCTGT CTTCATTCGT CCCAAATGGG CTTTGCTATA AAAAGCAAAT TAAACAGCCA TTGTTCCTTT TCTCCATGAG 000160 000161 GCTGGCATGC TAACATCCTG CCTAATACCA AAGCTCCCGG ATGTTTGTTG CTGGCCTGGG GACGCCTGCC ACCGCTTACA 000240 000241 GCAATAAGAA AAAACATGCC TTCCACTTGG GAACAGAATC TCTCTTAAGT TCCAGGCCTT TCTTTTTCAT CATGTCCCTC 000320 000321 CCCCCTTTTT TTAACGTTAT GACATATAGT ACACAGCAGA AAAGGGCTTT CTTGTTAGCT CCAGCATTCT TCTCCGTGCC 000400 000401 TGGCGAAGTA CTCCCACGGC CTTACAAATA GGCTTAGGCG TCTAATCACA AGAGATCCTG AAGGCCTGG |
Predicted Small Protein
Name | NONHSAT125819_smProtein_200:430 |
Length | 77 |
Molecular weight | 8531.9248 |
Aromaticity | 0.171052631579 |
Instability index | 58.0131578947 |
Isoelectric point | 10.2109985352 |
Runs | 13 |
Runs residual | 0.0296430732002 |
Runs probability | 0.0320410908646 |
Amino acid sequence | MFVAGLGTPATAYSNKKKHAFHLGTESLLSSRPFFFIMSLPPFFNVMTYSTQQKRAFLLA PAFFSVPGEVLPRPYK |
Secondary structure | LEELLLLLLLLLLLLLLLLEEELLLLEEELLLLEEEEEELLLLEEEEELLHHHHHHHHHL LLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL LLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii iiiiiiiiiiiiiiii |