NONHSAT125829

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT125829

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2335 nt

Genomic location

chr8+:29605841..29656007

Exon number

4

Exons

29605841..29606095,29647848..29647963,29648611..29648898,29654351..29656007

Genome context

Sequence
000001 GGGAGATGAC ACAAAACCAA ACCATATCAG TCTTTAAAGA GTTAAGTTAA AATAAGCTCT TTAAAGTGGG CCCTAATCCA 000080
000081 GTATGACTGG TGTTCTTATA AGAAGAGGAG ATTTGGTCAC AGACATGGTT GCATGCAGAA TAAAGACTTT TCGAGGACAC 000160
000161 ACTGAGAAGG CAGCCATCTG CAAAACAAGG AAAGAGTCCT CAGCAGAAAC CAGTCCTGCA GACTCCTTGA TCTTGGACTT 000240
000241 CCAGCCACTG CAATTGATGT CAAGCTTCAG CACCCTTGCA TCTCTGGATA AATGAAATGT CACCCCAGCT GCCGTCCTTG 000320
000321 TTCAGATCTG TGCAATAAAG AGCAAAGCAT AAAACCAAGT CAAGGCTTTG AGGGAGTGAC CTACAAAATG CATAATGTGA 000400
000401 AACAATGCAA AAGCGAAAGG TGCAAAATCC CCATCAAAGA GCTGGAGGCT GACAGATGCG CCAGTGATAA TTCCCATCTT 000480
000481 CCAACACAGG AGCACAGCTT CCATTTTCCA TAACAGAACA ACAGCCAGAG CAGCTGGAAG GCAGGGCCGC ATCCCAGACT 000560
000561 TCCACCAACA ATGGGATGAG ACTTGACATC TGGAATCACA ACCACAACAG ACCTGAGAGA CCCACCAGCT TGATGACAAG 000640
000641 CTTCTTCTTT CAAAGAAAGT TTTAGGCGGT CATGACCATG GGATGCTGGA CCAGGATGGT AAGCTTCAGG AAACAGAATC 000720
000721 TGGAGAATGC CCAGCTGCTC CCACAGGAAG CATCAGGGAA GAAGAAGAAG AGGTGTGAAG TCTGCCTTCT GCTCTGCTGG 000800
000801 GATCCCTTTC ACATCTCCTT TGCCTCCAGG CAGTTTTGGT TCCTGGCCAT TTCCAGGTGT GACTCACTCA GGATGGTAAG 000880
000881 CATCTTCTCT CCTACCCAGA GTAGAGGATG AAGACCTCAT CTCAGAGGTT GAAGGGAGCT CCAGAGAGAG GTCTCAAACT 000960
000961 TCCAGCATTA ACTGCTAAAG AAGCTTCATG AGCTGCTGGA GAACCTGGGA AATGACCAAT GATAGGGACA GAGCTCAAAT 001040
001041 ACTCTGGGAC ACTCTAGTAG CTGAGAAAGT TCCAACTCCA GGGTGATAGA GGACTGCCTG GCAAACCATC ATCAAAGCAG 001120
001121 AAGACCTGAT ACTAACATCA CAGGCTATGG TTTATTACTG AAGATCAGTG CTTACACCCT GCCAGAGGTT CAGAAGCAAA 001200
001201 CTTATCATTG TTCTCCCTGG AGATGTTGGC CCACATTCTG AAAAGTGTGG TCAGTAGTAG CAACAGAAAG CAATTGTGCT 001280
001281 TGCCAAGCAC AATGTCACTG TCCCCAGCCC TTCCCCCAAC ACAACCCAGT AGGTGCTTCC TGGCTGCAAA CTTGGGAAAG 001360
001361 TCACTTGACC TGTCTGAGGT TCCACTTCCT AATCTGGCCT GGCGAAGATA AGAAAAACAG TTTATTTAAA GTGTCTAGCA 001440
001441 AAGTGCTTGG ACCAAAATAG GACCTCTGAA ATGGTTATGG TAGTGCTGTT AAGGTGATGT TTTAAGTGCT GATGAGCACA 001520
001521 AAGATGGGTA AGATATTCCT TCTGTTAAAA TCTACAGTCT AATGAGAGAG AACAAGATGA ATGCACAATA ACTGTCATTC 001600
001601 AGAACAGGAT TATGAGAAGG TGTGAATTTC TGTGAAAAAT CAGAACAGGG AGTAATATGA TCCCAGGTGA TTGGCAGGGG 001680
001681 GTGGGGGTCT GGATTCAACT GGAGAGGGAG CTGGCAGGGA AGGCTTCCTG GAGGATGAGA GTTCAACAAG GGGCAGGTGT 001760
001761 AGGATGTGGG TGGCCAAGTG ACTGGGCAGA AGGAGCTGCA GAAGTAAGAC CCCAAATCAG GAAGACAAGG GCCTGCTGAG 001840
001841 AAACACGAGC TACAAAGTGC AAGTGCAGGA AGAGTTGGGA TGAGATTAGA AGGGGGTCTG GGGCCAGACT GTGGAAGGCC 001920
001921 CAAATGCCGG GCTAAGGAGT TTGTACTTAA TTCAGTGGTC AACGGGGAGT CATTGGAGGC TGTTGAGCAG GAGAGTTGCT 002000
002001 TTCTTTACAG CTGTGCCAGA CTAAATTAAA CCTAAACAGT ACTTTATAGC TGGAAAGGGA AGGCCCAGGA ATAGCTCTTG 002080
002081 ACTCAGAAAC AGGCATTGGG GAAGGTAATG AGAAACAGCC GTGACTGATC AAAGCAGAGA GGTTAATTAA ATTTGTAATT 002160
002161 ATTGTGAAAG GCCATTAAAA ACCCTAGTTC ACTAGAGATA ACTGCTCTAG TGGGGCTTCA AAGACAAACG CTTCTTTTAA 002240
002241 CCTTGAATAG GGGGATGTTT GCTTCTCTGT GGAGGAGATA TGATTAAGAT ACTTAATAAA TGGTAGATAA ACATGAAAAA 002320
002321 AAAAAAAAAA AAAAA
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Predicted Small Protein

Name NONHSAT125829_smProtein_671:910
Length 80
Molecular weight 9233.8001
Aromaticity 0.113924050633
Instability index 62.6037974684
Isoelectric point 9.73065185547
Runs 15
Runs residual 0.0495925091035
Runs probability 0.0823176117293
Amino acid sequence MTMGCWTRMVSFRKQNLENAQLLPQEASGKKKKRCEVCLLLCWDPFHISFASRQFWFLAI
SRCDSLRMVSIFSPTQSRG
Secondary structure LLLLLEEEHHHHHHHLHHHHLLLLHHHLLLLLLEEEEEEEEELLLLLLLHHHHHHHHHEE
ELLLLLLEEEEELLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
HLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTT
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