NONHSAT125957
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT125957 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
583 nt |
Genomic location |
chr8-:33229347..33235074 |
Exon number |
3 |
Exons |
33229347..33229729,33230162..33230322,33235036..33235074 |
Genome context |
|
Sequence |
000001 GATGGGCTCC TCTCCTGAGT GGGAAGGCAA GGAAATAGGG GCTTACCACC CAAAAGATGG GAGGCAGAAG ATACCCACCT 000080
000081 GAGTTGCCCA GAGCCCACAG TGTTTGCTTT CTCACCACTC CGGACTCCAC CTTTGAGCTC TTTGCGAGAG ATGTGGATTT 000160 000161 CCAGCTTTGA ACAATCCAAG AAAGAAGCCC AGGCACTAAG CTTATTGGTA TTTGGCAAAC CTGGTATCCT GCAGCCGAGC 000240 000241 ATGAACATGA AATACATTAG AACTTGGCAA TGAGAGATCC CATCTGTTGG TTTCCAGGGA TGTAAGTGAG TAATAAAAGC 000320 000321 TGTTTCAAGT TTATCCACTA TCCACTCTTC AAGTGAAAAG AACTTATGTG TGTCTACCTT CTTCTCCATA CCCTGAGCCA 000400 000401 CCTCTCTCAC TTTCTTTAGT TGTGCCTTGC CCTATCGCCT CCCATTTTCC CTTCAAAGTA GAATGTCTTG TAAAGACACA 000480 000481 GTAACTCCTG TGTGTTTTGA TTAGTGAGAT GTTACCACTT ACCCCTTCTG CTGCGCAGAA TAATATTAAG AATTGCTATG 000560 000561 CTTATGATTC AGGCTGGACA GCC |
Predicted Small Protein
Name | NONHSAT125957_smProtein_56:169 |
Length | 38 |
Molecular weight | 4270.802 |
Aromaticity | 0.135135135135 |
Instability index | 41.0216216216 |
Isoelectric point | 5.49798583984 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0475004416182 |
Amino acid sequence | MGGRRYPPELPRAHSVCFLTTPDSTFELFARDVDFQL |
Secondary structure | LLLLLLLLLLLLLLEEEEELLLLLLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |