NONHSAT125958

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT125958

Source

NONCODE4.0

Same with

,

Classification

sense

Length

486 nt

Genomic location

chr8-:33229900..33235098

Exon number

2

Exons

33229900..33230322,33235036..33235098

Genome context

Sequence
000001 GAGTTGGAAC TTTATCCTAC ACTTGATGGG CTCCTCTCCT GAGTGGGAAG GCAAGGAAAT AGGGGCTTAC CACCCAAAAG 000080
000081 ATGGGAGGCA GAAGATACCC ACCTGAGTTG CCCAGAGCCC ACAGTGTTTG CTTTCTCACC ACTCCGGACT CCACCTTTGA 000160
000161 GCTCTTTGCG AGAGATGTGG ATTTCCAGCT TTGAACAATC CAAGAAAGAA GCCCAGGCAC TAAGGTGGCT GGTTGATAGG 000240
000241 AATCAAAACT TTTCATCTCA AGAGTTTTGG GGCCTAGTAT TCAAGGACTG ATTTCAAAAA TGATCAGAAT GAAACAGACT 000320
000321 AGAGCCTTCT TGAGGTTTAT TTTCTAGGTT GCCTTAATAT TTGAACATAA TAGCTATTCT GTTGACTATC CATCAGGATA 000400
000401 ATAATTAGTT GCTGCAGTAC TCATAATGAG CCCTTTCAAG GAATAGATGT AAATTACCCT TAGGGGTAGC CACTATATTT 000480
000481 TTTATA
[back to top]

Predicted Small Protein

Name NONHSAT125958_smProtein_80:193
Length 38
Molecular weight 4270.802
Aromaticity 0.135135135135
Instability index 41.0216216216
Isoelectric point 5.49798583984
Runs 5
Runs residual 0.0446317877511
Runs probability 0.0475004416182
Amino acid sequence MGGRRYPPELPRAHSVCFLTTPDSTFELFARDVDFQL
Secondary structure LLLLLLLLLLLLLLEEEEELLLLLLLLLLHHHHLLLL
PRMN -
PiMo -