NONHSAT126183
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126183 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
728 nt |
Genomic location |
chr8-:39675421..39695728 |
Exon number |
7 |
Exons |
39675421..39675611,39678521..39678689,39679105..39679181,39682338..39682416,39691463..39691518,39694655..39694731,39695650..39695728 |
Genome context |
|
Sequence |
000001 GGCTGGGACC CAGGACTTCA AGCCATGTGG CGCGTCTTGT TTCTGCTCAG CGGGCTCGGC GGGCTGCGGA TGGACAGTAA 000080
000081 TTTTGATAGT TTACCTGTGC AAATTACAGT TCCGGAGAAA ATACGGTCAA TAATAAAGGA AGGAATTGAA TCGCAGGCAT 000160 000161 CCTACAAAAT TGTAATTGAA GGGAAACCAT ATACTGTGAA TTTAATGCAA AAAAACTTTT TACCCCATAA TTTTAGAGTT 000240 000241 TACAGTTATA GTGGCACAGG AATTATGAAA CCACTTGACC AAGATTTTCA GAATTTCTGC CACTACCAAG GGTATATTGA 000320 000321 AGGTTATCCA AAATCTGTGG TGATGGTTAG CACATGTACT GGACTCAGGG GCGTACTACA GTTTGAAAAT GTTAGTTATG 000400 000401 GAATAGAACC CCTGGAGTCT TCAGTTGGCT TTGAACATGT AATTTACCAA GTAAAACATA AGAAAGCAGA TGTTTCCTTA 000480 000481 TATAATGAGA AGGATATTGA ATCAAGAGAT CTGTCCTTTA AATTACAAAG CGTAGAGggt gttacaaact tcacgaaatg 000560 000561 agttgggaag tgttgtctcc tctattctgg aagactttgt ggaggattga tttaattatt tcaacatctg taaaatccat 000640 000641 ctgggattgg acatttttag ggaaggattt ttattagtaa ttaaattttt tctcattaag tctattataa ttttctaatt 000720 000721 tcttttgg |
Predicted Small Protein
Name | NONHSAT126183_smProtein_557:676 |
Length | 40 |
Molecular weight | 4809.5793 |
Aromaticity | 0.230769230769 |
Instability index | 41.1694871795 |
Isoelectric point | 5.91949462891 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0454740454741 |
Amino acid sequence | MSWEVLSPLFWKTLWRIDLIISTSVKSIWDWTFLGKDFY |
Secondary structure | LLLEELLHHHHHHHHHHHHHHHLLLHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |