NONHSAT126320
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126320 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1984 nt |
Genomic location |
chr8+:42883692..42885673 |
Exon number |
1 |
Exons |
42883692..42885673 |
Genome context |
|
Sequence |
000001 AAGGTACATC AAGATGCAAA CAATTTTTTT ATCTTCATAA CTTCCTGCTC TTATTAACTT GTATTATGAA TCAAATTAAG 000080
000081 TTTTATGTAT AAGGCATTTA CTATTCCAGT GACTTAGCTA ATGAAAACAT TTAAAAATAT GTATTAATTT ACTTGGCCTG 000160 000161 CTACTAAAGT GCTTAACATA ACTAAATGGA TCTATAGTAA CATGTCTAAA TTTTTTAATG GAAATAAGGG ACTAACCATA 000240 000241 ATCCTTTTGA GTCAGCTTGG TGCTTACAAT TATTTTGTTA GGAAATCTTG ATGCTTTCTT CTTTCTCTTT AAATTTTTGT 000320 000321 AATCAAGCAA CAGACTTGAT CCAGCAGTGT CGAATTCCAA GCAAGTTATG ATGAAATTCT TATTGTAGTT CAAGTACAGA 000400 000401 TGAGTAAGTG GTGTGACTTC AGTTTATTAT CTTCTTGGTG ACCTACTTTA GTATGTGTTC TGTAGCGATT CATATTAGTT 000480 000481 AAGGGACGTT TTCAATATGC TTGAAATAAG AAATAGCATT TTACTCTAAA TACAAGAAAT GACTGTACAC AAATGCTAAT 000560 000561 CAGTGATTTG GGGCCTTTTA ATGTCTTTAA CAGCAATCTT TTATTTATTT ATTTATTTAT TTTTGAGACG GAGTCTTGCT 000640 000641 GTGTCACCAG GCTGGAGCAG TGGCACGATC TCGCCTCACT GCAACCTCCG CCTCCCGGGT TCAAGCTATT CTCCTGCCTC 000720 000721 AGCCTCCCAA GTAACTGGGA CTGCAGGCAC ATGCCACCAC ATCCAGCTAA TTTTTGTATT TTTAGTAGAG ACGGGGTTTC 000800 000801 ACCTTGTTGG CCAGGATGAT CTCGATCTCT TGATCTCGTG ATCTGCCCGC ATTGGCCTCC TGAAGTGCTG GGATTACAGG 000880 000881 CATGAGCCAC TGCGCCCGGC CCAAATCTTT TATTTTTTAA CAGCCTTAGT TATTTATAAT TCAAATGCAC TAAAATATCA 000960 000961 TCGCTGTCAT GAACTTTGCT GTTTACAGGT TCTGTGTAAT TCAGAATGCT TTGTACTTAG AAAATAATTT CTAGGCTTAT 001040 001041 CTTGTTTTGC AGTTTTCATG TTTTGACAAT TGCCCACCAT TTACAATACT CAATTTTTGA TTATGAAATG AATAGTAAAA 001120 001121 TTCAAACATA TCTAATAATA ATTTGCCTTA GTTTGATTAA TAAATTATAT CAAAAAACTT GGGGATAGAA AGAGGCTTTT 001200 001201 TTTTCCCCCT GTAGTATTTT TAAAACTTTT TAGATGAGCT GGATGAAACC TTAGTACATT GGAGCTGGAG TTGTATTGAG 001280 001281 TACAGCCCCA ACTCTGAAAC CTTATATTCA TGTCTTAAGT ACCATTGATT GTTCTGTGAA TTGTTGTTAG TTTCATATTT 001360 001361 GACATTGTAG TAATCCACCT TGCATTTTAG TCTTTGCAAA AAGGATATTG CTAGGTATAT TCTTATTTCT GATTGAGTAT 001440 001441 TGAATTTACA TTTTTCAGAA TTTCATTCTT TGTCATTATA ATCCAAAAAC AATGTCCACA TCAGACTTGG AACTTCTCAC 001520 001521 TTCAAAAATG AAATACAGAT TTAGCAGTGT TGTACATAAT GATGTCCAAG CATTTTTCCA CCTGTTTACT GAGTTTTCCA 001600 001601 ACCATTTACT ATGTGTTGAG ATTGGTGGGT TTTCTGGCTG TTTTTCTGAG GTGAATGACT TGTTAAAGAG CCTCAGTAAG 001680 001681 AAATTTCAAC TAAAATCACA AAAACATAAA GTCCAGGAAA CCACCAGAAG ATGGATTTTT AGTGTTTTTG AAATCTTGTA 001760 001761 TTTCCTTTTG ATATCATTTA CTCATTTTAA TTTTACGACT GCCAACTTGT TACGGTATTA ATTATATGTA TGTGTTTATA 001840 001841 TGTATGCATA TAATATATGT ATATGTATAT GAAGAATAAA GTTAAGATTT GGTCAAACTA TATTTTCCCA TTCAAGTACA 001920 001921 AAAATGTTTT CAAGGCTGCA AAAAGTGTAC AGTTGTTAAA CAAGTTGTAA ATAAAGACTT GTAT |
Predicted Small Protein
Name | NONHSAT126320_smProtein_1856:1969 |
Length | 38 |
Molecular weight | 4578.552 |
Aromaticity | 0.216216216216 |
Instability index | 53.7054054054 |
Isoelectric point | 10.1461791992 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0105105105105 |
Amino acid sequence | MYMYMKNKVKIWSNYIFPFKYKNVFKAAKSVQLLNKL |
Secondary structure | LEEEHHHHLHHHHHHLLLHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |