NONHSAT126413
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT126413 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1182 nt |
Genomic location |
chr8-:47738850..47740031 |
Exon number |
1 |
Exons |
47738850..47740031 |
Genome context |
|
Sequence |
000001 CTATAATTAA ACTTCTACTA ATTATTCCCA CTCTAATCAC TATAACATTC CTTACACTAA TTGAACAAAA AATCTTAGGC 000080
000081 TATATACAAC TACACAAAGG ACCTAACACT GTAGGTCCCT AAAGACTACT TCAACCATTC GTTGATGCAA TAAAACTTCT 000160 000161 CACCAAGGAA CTGTTACGGC TCTCAACATC TACTATTACC CTTTATATTA TTGCTACAAC CCTTACCCTT TCTCCTCTTG 000240 000241 TGGACTCCCC TTCCTATATG TGGACTCCCC TTCCTATACC AGATCTTCTA ATTCCACACC AAACATAGGA AATATGTTCA 000320 000321 ACAAAAGAAT TACTTTGATA GACTAAACAA TGGAGGTTAA AATCCTCTTA TTTctagaac tatgggaatt gaacctaccc 000400 000401 ctgagaaccc aaaattctct gtgctactta ttacaccatg tcgtaAAGTA AGTTCAGCTA AATAAGCTAT CAGACCCATA 000480 000481 CCCTGAAAAA ATTGGTTATA CCCTTCCCTT ACTAACTAAT CCATTAGCTT AACTTATTAT CTCCTTTACT ATTGTCACAG 000560 000561 GAACTCTTAG CACAATGCTA GGCTCATACT GATTTCTCAT CTGAACAGGA CTAGGAATAA ATATACTAGT TCTTACCCCA 000640 000641 ATCTTAATTA AAAAATTAAT CCCCGCTCTA AAGAAGCATC CACCAAATAT TTCCTTACAC AAGCAACCAC ATCTATAATT 000720 000721 CTCATGATAG GTATCCTTTC CACTAACCTG TCCTGCAGAC AATGAACAAT AATAAACACT ATTAATAAAT TTTCATCATT 000800 000801 AATAATAATA ACAGCCCTAG TAATAAAACT AGGAATAGCC CCTTTTCACT TCTGAATCCC AGCAAAAACC AAAGGAAGCT 000880 000881 CTCTAATATC TGGCATACTT CTCCTCACAT GACAAAAACT AGCCTGTATC TTGATTATGT TTCAAATTTT CCATCAATAA 000960 000961 ACATGAATAT TCTCCTATCT ATCACAATCT TATTCATTAT AGTGGGTGGT TGGGGAGGAC TTAATCAAAA ACAACTTCAT 001040 001041 AAATTCCTAG CCTACTCCTC AATTACTCAC ATAGGTAGAA TAATAGCAGT ACTAATTTAT AACCCAAATA TTACCATTCT 001120 001121 AAACCTGATT ATTTACTTTT AACAACTACT GCATTTCTAA TACACAACCT AAGTAAAAGC AC |
Predicted Small Protein
Name | NONHSAT126413_smProtein_908:1141 |
Length | 78 |
Molecular weight | 8745.3402 |
Aromaticity | 0.12987012987 |
Instability index | 45.7194805195 |
Isoelectric point | 9.52301025391 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0888535594418 |
Amino acid sequence | MTKTSLYLDYVSNFPSINMNILLSITILFIIVGGWGGLNQKQLHKFLAYSSITHIGRIIA VLIYNPNITILNLIIYF |
Secondary structure | LLLEEEEEEELLLLLHHHHHHHHHHHHEEEEELLLLLLLHHHHHHHHHHHHHHHHHHEEE EEEELLLEEEEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLHHHHHHHHHH HHHHHHHHHHHHHHLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiTTTTTTTTTT TTTTTTTTTTTTTTooo |