NONHSAT126427
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126427 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
465 nt |
Genomic location |
chr8-:47862330..47863520 |
Exon number |
2 |
Exons |
47862330..47862558,47863285..47863520 |
Genome context |
|
Sequence |
000001 GATGCGGGTC AGGAACTCTA GTCTAGAGAG CACATTCTCT GCTCAGTTGC CCGGGGAAGC CACTAGCTAC AGATGCTGGA 000080
000081 GAATTTGGGC TGGTTTCTTC TGCATTTTAA CAATCCCTGG GGCTTTCTTT GGTTCTTTCT TTATTTGAGT GAGGTTGAGA 000160 000161 TCATCTTTCT ATCATGTCTC TGCATTCAGT GATATCCATA TTTATCCATG TTTGAAAAGA CACAGACATC AATCTGggtc 000240 000241 ttactctgtc acgcaggatg gaggctggag tccaatggca caattgcagc tcactgcacc ctcaaactcc tgggctcaag 000320 000321 ggggcctccc atcttaccct cccggatagc tgggactaca ggcgtgcacc atcatacctg gctaattttt agtatttttt 000400 000401 gtagagacgg ggtttctcca tgttggcaag gctggtcttg aaatcctagg ttcaagcaat tctcc |
Predicted Small Protein
Name | NONHSAT126427_smProtein_257:391 |
Length | 45 |
Molecular weight | 4940.4478 |
Aromaticity | 0.113636363636 |
Instability index | 43.7477272727 |
Isoelectric point | 6.80572509766 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.00741918388976 |
Amino acid sequence | MEAGVQWHNCSSLHPQTPGLKGASHLTLPDSWDYRRAPSYLANF |
Secondary structure | LLLLEEEELLLLLLLLLLLLLLLLLLLLLLLHHHLLLLHHHLLL |
PRMN | - |
PiMo | - |