NONHSAT126460
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126460 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
464 nt |
Genomic location |
chr8-:48849014..48852510 |
Exon number |
2 |
Exons |
48849014..48849077,48852111..48852510 |
Genome context |
|
Sequence |
000001 CAGACTTATG TGTATCCTTG GTCTCTTAGT CCCTTCTCTA GGAAAAATGT ATCACATAGC CTTATTTAAG ACACTTTTCT 000080
000081 GAACCTGATA GAGACTAAGC AAAATGGAAG CAAAGGGTCT TTATGATTAA AAGCAATTGC GTGTAACTAT AACAGTACAT 000160 000161 TAGTAGCATC TAAACAGTTC TAGTTTTTCC ATGTTTGTAT AGATTCCATT GCTATTAAAT ATTTCCAAAA AAATAAATAT 000240 000241 TATGTATTTG CAGGTTTCTA ATATGGTGGC GAAAAATGCA GAAATGCATA AAAATAAACT GCAGTACTTT ATGGAGCAGT 000320 000321 TTTATGGAAT CATCAGAAAT GTGGATTCGA ACAACAAGGA GTTATCTATT GCTATCCGTG GATATGGACT TTTTGCAGGA 000400 000401 CCGTGCAAGG TTATAAACGC AAAAGATGTT GACTTCATGT ACGTTGAGCT CATTCAGCGC TGCA |
Predicted Small Protein
Name | NONHSAT126460_smProtein_275:415 |
Length | 47 |
Molecular weight | 5535.4444 |
Aromaticity | 0.108695652174 |
Instability index | 40.002173913 |
Isoelectric point | 7.80096435547 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0384538950716 |
Amino acid sequence | MQKCIKINCSTLWSSFMESSEMWIRTTRSYLLLSVDMDFLQDRARL |
Secondary structure | LLLEEEELLLLLHHHHHHHHHHHHHHHHHHHHHEELLHHHHHHHLL |
PRMN | - |
PiMo | - |