NONHSAT126478

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT126478

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2517 nt

Genomic location

chr8-:49340703..49343219

Exon number

1

Exons

49340703..49343219

Genome context

Sequence
000001 ACTGTTTTGA TTCCTGATGC TGCACATCTG CCACGTTTCT GCACAGAGCT ACCAGCCCGG GCAGACACTG AGGACCCTCC 000080
000081 TCGCGCACTG GAGCTGTGGC CTCGGCAGCT GTGGGAATGC GGACAGGAAG CAGGGGACCC TGGAGGCGAG AGGAGGAGGA 000160
000161 CATCCTGCGG GGATAGATAA AAAATAACGG CCGGGCTGTG GGAACCTCTT CCGAGCAAAC ATGTGAGCCC AGGAATTTCC 000240
000241 TGAGCCAGAG ATCTGACTCC GGTTATTTGT TGTAACTGAT TATTTGTTTT CCTGGAGATT TTGCATAATT TTGACAAAGG 000320
000321 GAAAGAAGAT ATAAAGCCAA GACATGCATG ACTGCCCTTC TGAAGCCTCT GCTCACAGAG CAGAGGGATA GGAGGCTGTG 000400
000401 ATTCAGATTA TGGGGCCTGC AGGCTGGGGA GGGCGACCCT GCAGGGGCCC AGGAGCAGGC AGAGTGTGCC CCACAGACCC 000480
000481 CTCCCTGGGG CAGAGGGACA GCAGATTACT GGGCCCGAGA CGCATTAGGT GGCACATGCT GGTTCCCTCT GTCCAGCGAG 000560
000561 CCTCTCCCCC AGCATCATCC AGCCCTGGGC CTCCAGCAGG CAGAGGAGAT CATGACCAGG AAGCAATTCA TCACCATCCA 000640
000641 AGGCCTTAGC AGACTCTGGC TTTCCTTTGA ATTTCCAAGA AAACTGCTCC ATAATTTTTA TCAAGACTTA TCATTTGCCC 000720
000721 ATCTCACCCT ACACACTAGA ATTTTAAGCG ATGAAGTACA TGTGGAGACT TACTTTGTAG TCTTTTAAGA TAATGACCAA 000800
000801 ATGAACATTT CTGGCCTCAC TCAGCATCTG CTCTGACACG GGTTTAAGGG GCTGCCGCGG CCAGGAAGAG GTGGGCCTGG 000880
000881 TCCTGTCGGT GGATGCGCAT TCTGCTTCCC TTAGGCGGGG CTGGGCATGC TGGGACCTCC CCTGTGAGGG GACAGCGGAA 000960
000961 CTCGCAGGGC AGACCCATGT CCCTGGTGTC TTCCTTCTGA TGGGCCTTCC CCTCATGTCG GGATCCACCT TACAGGGCAT 001040
001041 CTGGCCTGGT GTCTGCACAT AGTGAAACAT GGCTGAGTGT CCCTTGCATT AAATGCATGT CCTTGGGATC GCGGTTTCCC 001120
001121 TCTCCTCTCC CTTGTCTTTC CCAAGAAACC CTCCACCCTG ACGACACCCC ACTAATATCT CCATGTGGCC AATTCCTCAC 001200
001201 AGGGTCAAAT ATGCTGGGCC ACCCCCTCTG AGGCCGCAGC TGCATCTCAG GTTTGCATTC TCACCACGGC CGTTCTACTG 001280
001281 ATGGGAGCTT CATTTCTATT TGCTCGAGGT ATTACACCTA TTTTATTTTT CTTTAATGAA ATCCTCCTCA CTTCCATCAC 001360
001361 CTCAGTGCAC CCCTCTCTTC AGAGCTTTCC TTCTCTCCCC TCCTCCCTCC CCATCTTTCT TCCTTCCTGT CCCCAAAGAC 001440
001441 CAGGCCATGG TGCCCTCGAA GGACACAACA GAGCCCCATG TGGACTGGGA AGCTGGCCCT GGCCCAGGGC CCCTCCAGCA 001520
001521 CAGCCTTTCC CCAACTGGCC TTAGGCAAGT GCCCTGCAGT GTCTATCTGC AGCCATCTCT GCCTCATGTG TTTACAAATT 001600
001601 CACCTTCTGC TGTGGATCCC TGTCAACCGC AGGTCCGCCC AACACATTTC GCCCTGGATC TCACTGGGTG GACGTGAATA 001680
001681 TCCACCTGCA CGACAGTAAA GGAAAAAGGA CAAGATGGAG TTGTGGGGGC AGGGGGTGGT TCTTCCCATA AAAACACAGA 001760
001761 AGCATCACAA GAATAATATT TGTTAAAAGC CTCCAGGATT TGGTGCCGAA CATCTCTCAA GGCATCTCCT GATTTCCCAG 001840
001841 AGCTGATGGA AATATTCTGA AGGTATTAAT AGAATGCAGA TGTTGGAGAA TGCGACTTAG AATCCTACTG AACAAATGAC 001920
001921 CCTGTTGGGA GGCAGTTTGC AGTCTCCAGG GACATTCCAC AGAGGGCCCA GCTGATTGTC TCATATTGAA ACAGCATGTC 002000
002001 CCAGCATTCC AGCTAGAAGA AGCGGAACAG GGCTCCTCCA CCAGATATAA ATCACAAGGC AAAGGGCAAC TGAACTCCTT 002080
002081 CAGTCCTGCC CTCCCTCCTT CCTTGGTTCA CCCTCCACCC CCTCCCCCGC TCCCGCCCCC CAAGGAAAAC AAAGCTTGAG 002160
002161 TAAGAGGCTG CCAAGCCAAG CCACGCAGGC GCCAGACGGC CGAGCGCGGC ACACACGACG GCCGTTTGGG AGGCTCACAG 002240
002241 CTTTCGGCAC TGTGGCCCTG ATGTTTTTGC TTCACTGCAA TTTGTTTCTG ATCTCCAGTC AAGTCCTTAC AACGCTGGGA 002320
002321 TCCTCTAGAG AGTTTATACT TTGACCTCGT GACAATTAAC ACCAGAGGCC AAGAAAAAAA AAAAAAACTC GATAAGAGAG 002400
002401 AAACTCAATT GGTGGGAGGT GGAGGGTGGG AGGACGGGCG GGGGCCTATT ACTAAAGTAA ATGCGTTACT TGTGAAATTA 002480
002481 TTTCCCATCC AATAAAAAGA ATGCAGTGTC TTTAAAG
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Predicted Small Protein

Name NONHSAT126478_smProtein_1280:1543
Length 88
Molecular weight 9462.8507
Aromaticity 0.126436781609
Instability index 65.1724137931
Isoelectric point 9.00738525391
Runs 5
Runs residual 0.0807881773399
Runs probability 0.0334393216747
Amino acid sequence MGASFLFARGITPILFFFNEILLTSITSVHPSLQSFPSLPSSLPIFLPSCPQRPGHGALE
GHNRAPCGLGSWPWPRAPPAQPFPNWP
Secondary structure LLLEEEELLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooooooooo
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