NONHSAT126647
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126647 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
997 nt |
Genomic location |
chr8+:56438734..56446632 |
Exon number |
2 |
Exons |
56438734..56439309,56446212..56446632 |
Genome context |
|
Sequence |
000001 CTTAATTATT CGGTTATTTG GATCTAATTC ACACAAAGTA GTCCAGTTCT CTAGCCACCA CCTGTAATGG GTGTGTCATC 000080
000081 CAGAGACTGT GTCCCCACGA TGACATCCAC AGGAAGTAAC AGAGGGCTCA ACCTAGGACT TCTTTTGGTA CAAAGCCCCA 000160 000161 AATCAATTTT TTTAAAAAAT AGACAATTTT TATAAGTAGA CATACTTCCT AGTACTCCAT GATTTGATCC TCCAAGCAAG 000240 000241 ATTTCCACTA AAAAATACTA ATCTTTTGTT GGGATGTGGA AAGATTACCT AGTCACCAGT AAAGGCCCAG GAAAAGGCTC 000320 000321 TTCTTGTCAG CACATGGTGA AAACATTCCA TCCCCACTGG AGAAGGAAAA AACGATTTTG GCAAATTCTT CACTTTTGTG 000400 000401 CAGAACCTTG AGTTATTAGC TTCATTGTTT CCAAGACAAC TTTTAACTGA TGATCTTTGG AAATTGAGTT TCTCAGTTGA 000480 000481 ACTGTACCTT TGATTCTATG AGTAAATCAC AGATTACAGT CTAATAGAGT CAATCAATCA ACACAAACCC AACAGGCCCC 000560 000561 ATCATGCTTC AATCATAAAC ATCTTGGAGC TTGTCAAGCT TTACTGGAGG TGATTTGCAG TTAATTAATT CAACAGACAC 000640 000641 TTTAATCTTG CAAATTCTTG ACTTGTAATA TTGTAACCAA GCTCCTGCAA GGGAACATTA ATCAGTTAGT GAAAAAGGAG 000720 000721 CACTTCCGTT CAGCCGTAGT ACCATGACGT GCACAGGCCT GAAGAGAAAT ACCTCTGTGA AGTGGAGCGC TAGTGAATTC 000800 000801 CTGCTACCTG CTTCTTATGG CTCACGCTAT GAATATTCAC CTGCTTCATT TGTTTTTTCC AGTAAACGCT GTTTTGAAAA 000880 000881 AAAAGAAAAA TATTCCCggg ggcttgcata gctcagagaa cggagtactg ggtcgtggag acttgcttta aatggattca 000960 000961 aatccacatg tttggaaatg aaaataatgc actgtca |
Predicted Small Protein
Name | NONHSAT126647_smProtein_743:910 |
Length | 56 |
Molecular weight | 6282.1032 |
Aromaticity | 0.163636363636 |
Instability index | 50.8381818182 |
Isoelectric point | 9.69586181641 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0418653948067 |
Amino acid sequence | MTCTGLKRNTSVKWSASEFLLPASYGSRYEYSPASFVFSSKRCFEKKEKYSRGLA |
Secondary structure | LLLLLLLLLLLEEELLLLEELLLLLLLLEEELLLEEEEELHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |