NONHSAT126648

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT126648

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5183 nt

Genomic location

chr8+:56449431..56454613

Exon number

1

Exons

56449431..56454613

Genome context

Sequence
000001 TCATTGCTCT TCTGCTGTTC ATATCATCTT AGTTATTCAC AAAGTCTACT TGATAAAATG GCTCAAGGGA AATACAAGTT 000080
000081 TCTTAAGTTT TTATTCTTCA AATAGAAGTT TTAATTTTAA GCATTCCTTA TGATATTTTT TAAGCCTAAA AACCATTCAA 000160
000161 ATTGCTTGAC AAAATTATTT CATGGTGAAT TTTATAAGGT TGATAGAAGT AAAAGCTATT TTTCCCAAAA CAAACAAAAT 000240
000241 ACCATACATA GTTTTTTGGG TTTGGTTTGT TGATGTCATG CCAATTTCCA AGCACCAACT GGTTACCACA AACATGGGAA 000320
000321 TATTTAGTGA TATCTTTGTA GTCATCGTTA AAATTCCTGG GAAAAAAAGA AAAAGTTTAC GTCAAAGGAA AATTCACCTC 000400
000401 CCACAAGGAA AGTCTGAGAT GTTCATCCTG ACATTTGCGT TCCTGATTAT TTGTGGACAT TTCTTCATTG TGACTGTAGG 000480
000481 AAGCTGAGCT TGTTTCTCCT AATTTGACAC TGGGTTGGTG AGCATTGTCT CAAATTTTGT GCTTGCCTCA TTTATGGTCC 000560
000561 TGAAGCTTAG CAGAAAAACA GACAAGCTAT TCAGACCAGT TTTCTTTAAG AGCACTTATG TTGCAGAACA TGATACAAAT 000640
000641 GATTCACCGT GAGCAGGCAC ACAGAGTACG GAAAGGTATT CAACTATGCA AAGATATTGA GGGGATTTCC AGAGAAAACT 000720
000721 TAAATGTTTT GAAGATTTGT AGGTAGGGTT TTGATTGTGT CACATTCTAC ACTCAGTGCC AAGTTAGAAT GTCTTTATGG 000800
000801 GGAAGGCAAT AAAGTTACTT GTTGGGTCCT TCCTTCCCTT ACAAACAGAA TGTTTTTATG AAATCAAATG GATCCTCCAC 000880
000881 TTTGTGTAGT AAGGACCCCC CAGGCCCCAC AACATCATCA CTGTGAGTCC TATCGCAGAT GTGTGTACCA GCCCAATTCA 000960
000961 GTTTTGCTTT TCTTTTTCCC TAAGATTTTT ACTTCACCAA ATCCCATTTC AAATCTTTTT ACCTTCATGT TACCAACAGG 001040
001041 ATGTTTAGTT GAATCAGCAA CAAAGACGTG ACAACCTATT GTCCTCCACA AAAGCATGAG TCATTTTATT CAGTGATCTT 001120
001121 TGGTAGTACG ATAATCAATG GAATTTATGG TGTCGTAGAA AACCAAAAAT CCATGTTGAA TATAGTGACT GTCTTAAATA 001200
001201 TACTTAAATA TGTTATTCTA CAAAACAATA TCCTTTTACA CTATGGGATG GATTCCTTTC TGGATGCAGG GATGGGAGGG 001280
001281 TCTATGGGTC AGTGACTGGG ACAAAGGAAC TGGGAATCTC TGCACAACTG AGCCCTAATC CCTGGTCCAT CTCTCCAGCC 001360
001361 TCAGAAactc accctcagcc tcattttccc catatgcaaa agagagatat ttatttacct acctcatagg ggtgttgtgg 001440
001441 agattagcta gatttgctaa agtgcttgta ggttagaaag tgctgtCATT CCTGAGAACT GGCATTAACA GAAGAGAGCT 001520
001521 GTGTGCAGCA CGGAGGAAGT GGAGTCTGAG GAATACAACA GCAACAACTC ACCAAGCAGA GAATACAATG GTTCTTCATC 001600
001601 ACTATATAAA ACTAACACTT TTCCTTCAAA GGTCTATGTA TAATTTTCTT CAATGATTAG CTTTTTAATG AGACAACTCC 001680
001681 TTTCATCCAG ACATTCAGAT GCTTTATATA AGTTGGCAAT TTTCCTGTTA ACCAAACTGA ATTTTATTAA ATGTTTATTA 001760
001761 AAATGCACCC AGAAAACTTG TCTCCTCCTG ATGCCTGAGG GGTTTGCATG CCTGATCCCA AGCTGCATTT TTTCAGAATG 001840
001841 CGTGCATGAT GCCCCAGTTC TGTACTCATG ATCACCAGGT GGCGTTCTGA AATCCACTAC TGGGGAAAGA TTTTTAACAG 001920
001921 ATATTAGTGA GATTAGAGTT GGTGTCATTT CCATTGAGTA TCCTCTTCAC CCCTAAGATG ACACATCTTT ACAACACAAT 002000
002001 AAAAGAACGT AAAGCCTTAT TTCCACCTGT AACTCCTGAA TTGATTCATT TTCACGTTAT AACTACATTT CAAATATTTC 002080
002081 GGAGAAGTTT TTACACAGGG CTTCAGCTAT ATACTGATAT ACATATGCTT ACATGTGCTT AGGTGGGAAT TCTACTAAAG 002160
002161 GATAAAGGAC ACAGTGTGAA AACAACATCA GAGAATATCC TGTACAACTT CCCCAAAAGT GACAAGTTTT CTTGTACTTA 002240
002241 AAAATTTAAT CCTGATAAGA ACTAATGTGA AATAACATCA TTTTGGTTTA TAAATATTTG TAATTTTTGA GACATAGAGG 002320
002321 CAATATCATG ATATAGGAAT ACATTCATAA AACTAGACTA GCAAAGCAGA TAATGTTTTC ATGATATGGC TTCATGAGGC 002400
002401 AAAGTTGTTG TACATCAATA TTATCATTGT GCCCTTATTT AAGGATTATA TTCCATTGTG AAAAAAATGT GCACACTCTT 002480
002481 AAAAACACAA AATGGGTTTC AGAAAGTTTA CCTTGAGAAG TGGGTTTGAA ATCATCTTGT GCTTGGAGCT GACATAAGAT 002560
002561 ACGCACTCAA TATAATCTCT TCTGGATTCT AAAATCTAAT TGGCAGTGAT ATTTCAAAGC CTTAACATTT CAAGGTGGTT 002640
002641 AATTAATATC TAATGCATGG TATTAAACTT TCTGAAGCAT GAATTTAACC TAGGCAATTA TCTGATTCAT TTTTTTTAAA 002720
002721 GTTTGTGCTG CCAAACCAGA CTGAAGTATT GTTTTTCTGG ACTAATACTA TGAGAATAGT AAGTGAGTCA AAAAATAATT 002800
002801 GGGACTGTCC TTTTTCCCCT GCCCACTTCC TAGTATCAAT ACTCCCCCAA CCAGAAATGC AGCAGAATAT CCTTTTTGCT 002880
002881 ATAAAGGAAA ATACTGTGTT TTTATTTGTT TTTGCAGAAG AAAACTGGTG TTGCCTATTT GGACTAGATG TAGGGGCCTG 002960
002961 GAAGAAGGAA GTGGCAGATT CACAGGTGGG GTGACCAGGA TGGGAGGAAA ATAGTGGGGC GAGTATGTCA TGGGGAGATT 003040
003041 TTGCCACAAA GATACAAAAC AGAATTGAAG TGTGTTAGAG CTGGACAACC CTTTGAAATG ACAGAGTCTA GATTCTTCAC 003120
003121 CAAACAGATG AAAAGACAAG TAGAGACAAC ATGTACTTGA GATATAAGCT ATACATCTCA TCACTGGAAG AAAGGAGACT 003200
003201 TCAGCCTCTT TTCAAGGCTT TCCAGACCAC ATGGAACTCT CCAGAGCCCT CCTTGAAAGT TTTTAGAAAA ACTACCATTT 003280
003281 TCAGCAAAGA TTCATGTGAT TATGCTGCTG AGGACCAGTC ATTCTGTAAA CATCACATAT GTGATGCTTT GTAAATGTAT 003360
003361 TAATTGTGGT CAATTTTCAT GGATATTTCC CATTAACATT GTATTCCATG AACAAGTGAT AGAAAACATA TGGAAATTCT 003440
003441 CTTTTGATCA AAAGGAGTGT CTCCCAATTA GTTTACGTGT GTTAGTATTG CTGACATATT ATTATCATCA CAAAATTCCT 003520
003521 TTTATATCTA GATGGTATCA AATAAGAAAA AAATGCATCA TTTGGTCAAT TGCTTATTGA AGATCCCAGC TGAAGCCTTT 003600
003601 CTTTGGTAAA GAGCGCAGAA AGAGACCATA GCTATTCTTG GATGAGAACC TTGCCTCTAC TAAATAGTTT CTGCTTTTCC 003680
003681 TCTCTGTAGC CAGACAGCTC AATAGCCTAG GGAGAGTCGA TGAAGGATAT GCAAATTACA TTTTTCCCAT TCTCAGAACA 003760
003761 AAGACAGCAA CCAATGAGCC AGAGGTTTCT TCTCTCTTTG AAACCAAATA GCACGCTGAA TTTAGGGCTA TGACAAAAAT 003840
003841 GTTGTTAAAG CAAGAGCAAA ATCATCCTTC CTATGGATTC TTTTCTCAGT GTTTACTTAA TTCTTTTTGC AGTTTGGATT 003920
003921 GGAGTTTCTA GTAATGATAA TTAATGCCAT TTTACATGAT AGCTTCAATG CAGAAATGGT GTGAGCCTGA GTTACAAATG 004000
004001 ACATGACTAG GGATACAAAC TTCGTCTGTA CTAACATCCT ACCAAGCAGA TTGGAAACAA ATACTACTAC CACTAATATT 004080
004081 CTGATGTAAT TAATAACATC TAATAGAAAA ATAGAAACAT CGTGCTTAGC ATGAAACCAT TGCACAATAT AAACCTGCTC 004160
004161 CCAAATGGCA AGGATTTTTG CTACCAATAT TTGTTCTTAA TTCTCCAGTT ATTTTAAGTA AATAAGTTTC ACATCTAACT 004240
004241 ACCTCAGCTA CTGTTGTTTT ATTTAGAAAC ATGAAACCAT GCACTTTGTA ATCAATAAGT CTTTTGTTTA ACATTTCAAA 004320
004321 AGGATATTTG GTGCAAAGCA ATTTTCAAAA ATTTGTACAT GATATACACC ACCCAACCTC AGGAGGTTGT ACTTAATTTT 004400
004401 GTTTGTTTGT TTCTAAGGTT GGTTTTGGGT AAAATCCTCA TTTCCACTCA ACATCAAGAT AAGCTGCTCT ATATTTGCTT 004480
004481 AATTTGCCTT AAACATTTTG TGCTCCTTTC CCTGTTCAAT TTTTTTGTTT TGTTTTAAAT CTATCTCTGA AAAAAAAATG 004560
004561 GAACAGGTGG CAGGTGAACA GCAAATGGAA GAGAATGGAC CAGTAATTTC TCAGTCCCCT GTTGTCAACT ATCTGCATGA 004640
004641 CATTCTGATT GTGCAAAAAT GCCATTCCTG TGCTTCCCCC TCCATTACAG AATAAGGTCC GAGAGACCCC ACGAGTGTGC 004720
004721 GTAGGGAACG GTGTAGACAT TTCCCCCAGT ATGAGCACAG TGCCTGGACC TGAATGATCA TCTTGGCAGT TCTTGTGCTT 004800
004801 TTACTTTGTA AACATTGTAC AAATGTATTT GGAATTTTAT TTGAAATGGA GACTTAAACT AGTTATTAAA TTTGTTTCCT 004880
004881 TCCTGTAAAT ATATATATTC AAATTCCATG TATCCAAACA TCCCTTTAGC GTTCAGATTG TAAGTGTGTC TTTATTCGCG 004960
004961 GGAGGCCACT GTCAGCAGGC AGTGACCCCC AGTGCCCTAG TTTGAAGCAC AGTGTGTGGA GTATTTGATG TACTACAGTA 005040
005041 CCATAGTTAT TTTGGTCTGT TAAGTAAGTT GCAATTTGTG ATGAAATGAA GTGGAAAGTA GTACTTCATA ATGAACAAAT 005120
005121 TTCCTTGGTT ACATGGTTTT TCTTGTAAAA CTTAAAGAAA AAAAAAGAAA ACTTGAAATT TTA
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Predicted Small Protein

Name NONHSAT126648_smProtein_1652:1870
Length 73
Molecular weight 8185.9267
Aromaticity 0.0972222222222
Instability index 58.7180555556
Isoelectric point 8.61492919922
Runs 11
Runs residual 0.0118613138686
Runs probability 0.0250598191775
Amino acid sequence MISFLMRQLLSSRHSDALYKLAIFLLTKLNFIKCLLKCTQKTCLLLMPEGFACLIPSCIF
SECVHDAPVLYS
Secondary structure LHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEELLLEE
LLEELLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHH
HHLLLLLLLLLL
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