NONHSAT126652

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT126652

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2588 nt

Genomic location

chr8-:56651317..56658606

Exon number

3

Exons

56651317..56652777,56656040..56656179,56657620..56658606

Genome context

Sequence
000001 ccaccgcacc tggccAAATT CTTTAATATA TGTGCTTTTC CTTTTTGTCT GTGTGGTTGA GTCTTATAGT TACTTTTCAT 000080
000081 TGATGTTGAG TATTTTAGAT TTAATAGACT CACAAAAAAT TTTACCAATT CCACGACAGC ATCTTGCCAA AACTTGTCAT 000160
000161 TTAAATATAC ATAAATTTCC CTTTGGagcc aggtgcagtg gctcacgcct gtaatcctaa cactttggga aactaaggtt 000240
000241 ggaggattgc ttgaacctgg gaggttgaga ctgcagtgag ccgtgatcac gccactgcaa tccagcctga gccacagagt 000320
000321 gagactctgt cccCAACTCC CCCCGAAAAA TTACCCTTAG AATCCCTGCT TGCAACTTTT CTCCAGTGAG CGTACTATTC 000400
000401 AGTAGCCCAC TAAAGACAAT TCAGTTTACC ACATTCATTT TATTTAGTGA AATTAATGAT TACTGTAATC TCTATTTTGA 000480
000481 GTTTCAAGGT TTTATGTGAA ATGTTAGGAA AACTGGTCAA TGAAATATTA TATATTACCA CTGGAGGGTA GTGTTTCCAA 000560
000561 TTTCTATTTT TACAAATGAT CAAGTTGAAT TTAGTTGATA GACTAATCGT GTGCttttat tttaaaaata ttttattttc 000640
000641 ataatatCAA ACAGGCCCTC AAAAGTTTGC ATAATCACTT TGTGATCCCC TCACGCCCCC ATGCTAATGA ATTTGTACCC 000720
000721 CTTTTCTCTT tctcccatgc caatactaac gagacccgac cctgcttagc ttctgggatc agacgagatt gggcatgttc 000800
000801 agggtggcat ggccatagGT GCCTTTTCTC TTTCTTAAAA AAAAAAAGTT TGCATTAGTT ACTCTAATGG AGACATTGAA 000880
000881 TGGATTAATT TATTTACTTT TTAATTCAAA TTCTCCTTTT CTTTAGCCCA TTATTCCTAT GTTTACACAA AATATTCGAG 000960
000961 AAGGATTTAG ATCACTTGGA GGAACAAGGT TATTTAGGTG GCTTTATGAA AAATTCCGCT ATCCATTTGC TCCAATGTAT 001040
001041 GGAGGTTTTC CAGTGAAGTT ACGGACCTAT TTAGGCGACC CCATTCCGTA TGACCCACAG ATAACAGCGG AAGAATTAGC 001120
001121 TGAAAAGACG AAGAATGCTG TTCAAGCTTT GATTGATAAG CACCAAAGAA TACCAGGAAA CATTATGAGT GCTTTGTTAG 001200
001201 AACGTTTTCA TTGATAACAA AGGGTCAACT AGAAGATGAT TTAGTACATT TATATTAAAT GTTTGTATCT AAGGTACTGT 001280
001281 CTTCTGAATT TTGTAGGTCC TATAATTAGT ATTTTTTAAA AAAATCATGT TAATAAGCAT CTTTCACAGA ATTCGTTTCT 001360
001361 TTAAAATAGT CAATTTTGTT TTTGCAATTG TGTCAAATAC TAACAAATTA CACACCTAGT AATTCAGAAA AAGATGTCTT 001440
001441 ATTTGTAAAT TCCTAACAAT TTATGCTAAA CATATAGATT CTTAAGTTTA TTAATAACAG CAGTTTAGGT TAAACAAACA 001520
001521 TTCCTGGATA ATGCGTTAAA TTTCTGTATC TGTCGCCCTG AGCTGATTTT GAAAGATGGT ATAAGCTAGG GGTTAGTATA 001600
001601 GTTGTTTAAG TTAGAAAAAA CATGCTGTTG tctgcccctc attcccttca tgaccttggg caagtcacgt aatgtttttg 001680
001681 tgcctcaACA ATTCACTTTT TAAAAACATG ATCGTATGAT GAATGATATT ATTTTGTTAT TTATATTTAC TGTGATTGAT 001760
001761 AACTGTTGAA CCaaaataat aaaataatta atttaaaCAA TGTCAAAATC CTTTAGCAGT TATGTATATA TTTTCTCCAT 001840
001841 TGTGTGTTTA AATTATGTCA TGTCCAGTTG CCAAGCACAA TGAAAAAGAT Gtattatttt ttaaattgaa taaaaaatta 001920
001921 ggaaaaataa aatttctaat tattattttt agtatgatat ttttaaCAAG AGTCTATAGG CAAACAATAT AGGGTGTGCT 002000
002001 GTGCATTGTC AGCCCTATAC TGTGGTCTTA ATAATGCCAG CTTAAAAATC ACTGTTGTGC TCTGCATTTC GTGTGTTAGA 002080
002081 AGCTGATTCT AGGCTGAGGA AAGCAAGAGT TCTCTACTTT TGCTCAATAT TGAGGCTTAC CCAGTTTGAC TCTACAGCCA 002160
002161 GTGAAGTGGT TTATTGCTTC AATAAAAATA TACTTGAATG ATGAATTTAT TTATGTTTTG TTTTGTTTTT ATTtagagat 002240
002241 ggggttttgc catgttggcc aggctggtct tgaactcctg acctcaggtg atccacctgc ctcagcctcc caacttgctg 002320
002321 ggattacagg tgtgagccac catgcccagc cTGAATGATG AATTTATGTG AACACAAAGC CCTCTGAAAA ATTAATGATT 002400
002401 TTCAATTTGT TGTCTTCTTG AAAACTGAAT TTAAGTATTA TTTAAACAGA AAAGTGTCAG AAATCAAATG CAGTATCTCC 002480
002481 CTCTCCCTTT TTTAAATGTT GAATTAGTAG GGTTTTTGTA TAGCTTTTTG TATTGTGTGT ATTTATGATA TGTGAAATGT 002560
002561 ACATAAAATT AAACAATGTG AAAATAAA
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Predicted Small Protein

Name NONHSAT126652_smProtein_938:1213
Length 92
Molecular weight 10664.2253
Aromaticity 0.142857142857
Instability index 53.4802197802
Isoelectric point 9.62567138672
Runs 11
Runs residual 0.0125915750916
Runs probability 0.0439691027926
Amino acid sequence MFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPQITAEEL
AEKTKNAVQALIDKHQRIPGNIMSALLERFH
Secondary structure LLLHHHHHHHHHLLLLHHHHHHHHHHLLLLLLLLLLLLEEEEEELLLLLLLLLLLLHHHH
HHHHHHHHHHHHHHHLLLLHHHHHHHHHHLL
PRMN -
PiMo -