NONHSAT126689
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126689 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1030 nt |
Genomic location |
chr8+:57124348..57128137 |
Exon number |
2 |
Exons |
57124348..57124396,57127157..57128137 |
Genome context |
|
Sequence |
000001 GTGTTTGGAG CTGGAGACGG CCTGGGTGCT GGCGAAGCGG AGGCCGGAGT AAGAAGACTG TTAGAATGCC CTCGGTAACA 000080
000081 CAGAGGCTGA GAGATCCTGA CATAAATCCT TGTTTGTCGG TAGGATGGTT TGCTTTAATT TTCATGAGTG TTAAGTTGGA 000160 000161 AAAACAGGCT GCTCTAGTTT TGTGGGCCTT TGTTTTCTGC AGTTGTTGAA TAAAGTTATT TCTCTAGAAA AAATATTGTT 000240 000241 GGCCAGCATA TCCTATTTAA CTAGAGCATT TTTAGATGTT TATAATTTCT CTAACAAACA TTCATCTTTT CTTTAGTTTT 000320 000321 CCTTATTTGT ATAATATGCA AGCATTTGGT TGTCACTGTA AAACTAGACA GGAAAATGTA ACACTGAGAA TATTTAGTCC 000400 000401 AAACATGGAA AACTGGAAGG TATGATATTT TTAAACTGTC ACTGACATTT ATTGTTTCAC TAGCAATAAT ATCACCATGT 000480 000481 CCTTGACAAC CTGGCTGAGA GTAATGGGCT GATAATATAA TTAGCCTATT TAAAGCTTAA AGGTTTTCAC AAAGGTATCT 000560 000561 GATAAACAAA ATGTTTTAAG AGTAAGCTTT TATTGGCATT TATTTGGTAT GATTTGCGAT ACTTACTTGT GGCTTTGCTA 000640 000641 CGTTTGAATA ATGTAGTTAT CATACTGGTC CCATGAAAAT TATACTCTTT AGTTATATGC ATTTTCCAAA TATATACATT 000720 000721 CATTAAATAT TTGGCACAGA AATTCAGCTT TGTTCTGTTT ACGTAGAACA TGTTTCTTAG ATATGTGTTG CAAACTGTCT 000800 000801 ACCCATATAG CTAAAGCTTT CCTTTAGATC Tgtgttcccc aaccttttgg gcaccaagga ccggttttgt ggaagacaat 000880 000881 ttttccacgg atggggaagg gggcgggcgt caaaaggcat tagattctcc taaggagctt gcagcctaga tccctcacat 000960 000961 gcacgcagtt cacaataggg ttcgtgatat tagatcccac aatagggatc taatagcatt agatgagaat |
Predicted Small Protein
Name | NONHSAT126689_smProtein_275:424 |
Length | 50 |
Molecular weight | 5931.9082 |
Aromaticity | 0.183673469388 |
Instability index | 42.4367346939 |
Isoelectric point | 8.80377197266 |
Runs | 13 |
Runs residual | 0.103254274683 |
Runs probability | 0.0530349353879 |
Amino acid sequence | MFIISLTNIHLFFSFPYLYNMQAFGCHCKTRQENVTLRIFSPNMENWKV |
Secondary structure | LEEEEELLLLLEELLLHHHHHHHLLEELLLLLLLEEEEEELLLLLLEEL |
PRMN | LHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | i???????????????????????????????????????????????? |